Publikationer

Expression pattern of resynthesized allotetraploid Capsella is determined by hybridization, not whole genome duplication.
Duan, T., Sicard, A., Glémin, S., Lascoux, M. (2023). New Phytologist, . vol. 237, ss. 339-353 DOI
Phylogenetic Analysis of Allotetraploid Species Using Polarized Genomic Sequences.
Leal, L., Milesi, P., Salojarvi, J., Lascoux, M. (2023). Systematic Biology, . vol. 72, ss. 372-390 DOI
Divergent selection predating the Last Glacial Maximum mainly acted on macro‐phenotypes in Norway spruce.
Tiret, M., Olsson, L., Grahn, T., Karlsson, B., Milesi, P. et al. (2023). Evolutionary Applications, . vol. 16, ss. 163-172 DOI
Allorecognition genes drive reproductive isolation in Podospora anserina.
Ament-Velásquez, S., Vogan, A., Granger-Farbos, A., Bastiaans, E., Martinossi-Allibert, I. et al. (2022). Nature Ecology & Evolution, . vol. 6, ss. 910-923 DOI
Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations.
Chen, J., Bataillon, T., Glemin, S., Lascoux, M. (2022). Genome Biology and Evolution, . vol. 14 DOI
What does the distribution of fitness effects of new mutations reflect?: Insights from plants.
Chen, J., Bataillon, T., Glemin, S., Lascoux, M. (2022). New Phytologist, . vol. 233, ss. 1613-1619 DOI
The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe.
Cornille, A., Tiret, M., Salcedo, A., Huang, H., Orsucci, M. et al. (2022). AoB Plants, . vol. 14 DOI
Genome-wide analyses of introgression between two sympatric Asian oak species.
Fu, R., Zhu, Y., Liu, Y., Feng, Y., Lu, R. et al. (2022). Nature Ecology & Evolution, . vol. 6, ss. 924-+ DOI
Teasing apart the joint effect of demography and natural selection in the birth of a contact zone.
Li, L., Milesi, P., Tiret, M., Chen, J., Sendrowski, J. et al. (2022). New Phytologist, . vol. 236, ss. 1976-1987 DOI
Competitive ability depends on mating system and ploidy level across Capsella species.
Orsucci, M., Yang, X., Vanikiotis, T., Guerrina, M., Duan, T. et al. (2022). Annals of Botany, . vol. 129, ss. 697-708 DOI
Genome-wide evolutionary response of European oaks during the Anthropocene.
Saleh, D., Chen, J., Leple, J., Leroy, T., Truffaut, L. et al. (2022). Evolution Letters, . vol. 6, ss. 4-20 DOI
How broad is the selfing syndrome? Insights from convergent evolution of gene expression across species and tissues in the Capsella genus.
Zhang, Z., Kryvokhyzha, D., Orsucci, M., Glemin, S., Milesi, P. et al. (2022). New Phytologist, . vol. 236, ss. 2344-2357 DOI
The GenTree Leaf Collection: Inter- and intraspecific leaf variation in seven forest tree species in Europe.
Benavides, R., Carvalho, B., Bastias, C., Lopez-Quiroga, D., Mas, A. et al. (2021). Global Ecology and Biogeography, . vol. 30, ss. 590-597 DOI
Leveraging breeding programs and genomic data in Norway spruce (Picea abies L. Karst) for GWAS analysis.
Chen, Z., Zan, Y., Milesi, P., Zhou, L., Chen, J. et al. (2021). Genome Biology, . vol. 22 DOI
Analysis of diversity-dependent species evolution using concepts in population genetics.
Kaj, I., Glémin, S., Tahir, D., Lascoux, M. (2021). Journal of Mathematical Biology, vol. 82 DOI
The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species.
Opgenoorth, L., Benjamin, D., Benavides, R., Heer, K., Alizoti, P. et al. (2021). GigaScience, . vol. 10 DOI
An introgressed gene causes meiotic drive in Neurospora sitophila.
Svedberg, J., Vogan, A., Rhoades, N., Sarmarajeewa, D., Jacobson, D. et al. (2021). Proceedings of the National Academy of Sciences of the United States of America, . vol. 118 DOI
From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?.
Chen, J., Glemin, S., Lascoux, M. (2020). Genetics, . vol. 214, ss. 1005-1018 DOI
Survival in the Tropics despite isolation, inbreeding and asexual reproduction: insights from the genome of the world's southernmost poplar (Populus ilicifolia).
Chen, Z., Ai, F., Zhang, J., Ma, X., Yang, W. et al. (2020). The Plant Journal, vol. 103, ss. 430-442 DOI
Genetics to the rescue: managing forests sustainably in a changing world.
Fady, B., Aravanopoulos, F., Benavides, R., Gonzalez-Martinez, S., Grivet, D. et al. (2020). Tree Genetics & Genomes, . vol. 16 DOI
The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe.
Martinez-Sancho, E., Slamova, L., Morganti, S., Grefen, C., Carvalho, B. et al. (2020). Scientific Data, . vol. 7 DOI
Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load.
Orsucci, M., Milesi, P., Hansen, J., Girodolle, J., Glémin, S. et al. (2020). Proceedings of the Royal Society of London. Biological Sciences, vol. 287 DOI
Cytoplasmic DNA variation does not support a recent contribution of Pinus sylvestris L. from the Caucasus to the main range.
Semerikov, N., Petrova, I., Sannikov, S., Semerikova, S., Tashev, A. et al. (2020). Tree Genetics & Genomes, . vol. 16 DOI
Genomic insights on the contribution of balancing selection and local adaptation to the long-term survival of a widespread living fossil tree,Cercidiphyllum japonicum.
Zhu, S., Chen, J., Zhao, J., Comes, H., Li, P. et al. (2020). New Phytologist, . vol. 228, ss. 1674-1689 DOI
Genomic data provide new insights on the demographic history and the extent of recent material transfers in Norway spruce.
Chen, J., Li, L., Milesi, P., Jansson, G., Berlin, M. et al. (2019). Evolutionary Applications, . vol. 12, ss. 1539-1551 DOI
Towards the new normal: Transcriptomic convergence and genomic legacy of the two subgenomes of an allopolyploid weed (Capsella bursa-pastoris).
Kryvokhyzha, D., Milesi, P., Duan, T., Orsucci, M., Wright, S. et al. (2019). PLOS Genetics, . vol. 15 DOI
Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae).
Kryvokhyzha, D., Salcedo, A., Eriksson, M., Duan, T., Tawari, N. et al. (2019). PLOS Genetics, vol. 15 DOI
Clinal variation in growth cessation and FTL2 expression in Siberian spruce.
Li, L., Chen, J., Lascoux, M. (2019). Tree Genetics & Genomes, vol. 15 DOI
Assessing the potential for assisted gene flow using past introduction of Norway spruce in southern Sweden: Local adaptation and genetic basis of quantitative traits in trees.
Milesi, P., Berlin, M., Chen, J., Orsucci, M., Li, L. et al. (2019). Evolutionary Applications, . vol. 12, ss. 1946-1959 DOI
Modeling a trait-dependent diversification process coupled with molecular evolution on a random species tree.
Tahir, D., Glemin, S., Lascoux, M., Kaj, I. (2019). Journal of Theoretical Biology, vol. 461, ss. 189-203 DOI
Evaluation of the ISL1 gene in the pathogenesis of bladder exstrophy in a Swedish cohort.
Arkani, S., Cao, J., Lundin, J., Nilsson, D., Källman, T. et al. (2018). Human genome variation, . vol. 5 DOI
Homeologue-specific expression divergence in the recently formed tetraploid Capsella bursa-pastoris (Brassicaceae).
Huang, H., Liu, J., Xu, Y., Lascoux, M., Ge, X. et al. (2018). New Phytologist, vol. 220, ss. 624-635 DOI
SWI/SNF regulates half of its targets without the need of ATP-driven nucleosome remodeling by Brahma.
Jordan-Pla, A., Yu, S., Waldholm, J., Källman, T., Farrants, A. et al. (2018). BMC Genomics, . vol. 19 DOI
A Single Bout of Electroacupuncture Remodels Epigenetic and Transcriptional Changes in Adipose Tissue in Polycystic Ovary Syndrome.
Kokosar, M., Benrick, A., Perfilyev, A., Nilsson, E., Källman, T. et al. (2018). Scientific Reports, vol. 8 DOI
Paternally expressed imprinted genes associate with hybridization barriers in Capsella.
Lafon-Placette, C., Hatorangan, M., Steige, K., Cornille, A., Lascoux, M. et al. (2018). NATURE PLANTS, . vol. 4 4, ss. 352 352-357 357 DOI
Gene expression profiling across ontogenetic stages in the wood white (Leptidea sinapis) reveals pathways linked to butterfly diapause regulation.
Leal, L., Talla, V., Källman, T., Friberg, M., Wiklund, C. et al. (2018). Molecular Ecology, . vol. 27, ss. 935-948 DOI
Ancient polymorphisms and divergence hitchhiking contribute to genomic islands of divergence within a poplar species complex.
Ma, T., Wang, K., Hu, Q., Xi, Z., Wan, D. et al. (2018). Proceedings of the National Academy of Sciences of the United States of America, . vol. 115, ss. E236-E243 DOI
Competitive ability of Capsella species with different mating systems and ploidy levels.
Mendoza, S., Lascoux, M., Glemin, S. (2018). Annals of Botany, vol. 121, ss. 1257-1264 DOI
Transcriptional and Epigenetic Changes Influencing Skeletal Muscle Metabolism in Women With Polycystic Ovary Syndrome.
Nilsson, E., Benrick, A., Kokosar, M., Krook, A., Lindgren, E. et al. (2018). Journal of Clinical Endocrinology and Metabolism, vol. 103, ss. 4465-4477 DOI
Oak genome reveals facets of long lifespan.
Plomion, C., Aury, J., Amselem, J., Leroy, T., Murat, F. et al. (2018). NATURE PLANTS, vol. 4 4, ss. 440 440-452 452 DOI
From America to Eurasia: a multigenomes history of the genus Abies.
Semerikova, S., Khrunyk, Y., Lascoux, M., Semerikov, V. (2018). Molecular Phylogenetics and Evolution, . vol. 125, ss. 14-28 DOI
Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements.
Svedberg, J., Hosseini, S., Chen, J., Vogan, A., Mozgova, I. et al. (2018). Nature Communications, . vol. 9 DOI
Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum.
Wang, X., Hu, Q., Guo, X., Wang, K., Ru, D. et al. (2018). Molecular Ecology, . vol. 27, ss. 2943-2955 DOI
Using the Ornstein-Uhlenbeck process to model the evolution of interacting populations.
Bartoszek, K., Glemin, S., Kaj, I., Lascoux, M. (2017). Journal of Theoretical Biology, vol. 429, ss. 35-45 DOI
Fine- and local- scale genetic structure of Dysoxylum malabaricum, a late-successional canopy tree species in disturbed forest patches in the Western Ghats, India.
Bodare, S., Ravikanth, G., Ismail, S., Patel, M., Spanu, I. et al. (2017). Conservation Genetics, . vol. 18, ss. 1-15 DOI
Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species.
Chen, J., Glemin, S., Lascoux, M. (2017). Molecular biology and evolution, . vol. 34, ss. 1417-1428 DOI
Cerium oxide nanoparticles inhibit differentiation of neural stem cells.
Gliga, A., Edoff, K., Caputo, F., Källman, T., Blom, H. et al. (2017). Scientific Reports, . vol. 7 DOI
A new Eurasian phylogeographical paradigm?: Limited contribution of southern populations to the recolonization of high latitude populations in Juniperus communis L.(Cupressaceae).
Hantemirova, E., Heinze, B., Knyazeva, S., Musaev, A., Lascoux, M. et al. (2017). Journal of Biogeography, vol. 44, ss. 271-282 DOI
Parental legacy, demography, and introgression influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae).
Kryvokhyzha, Dmytro; Salcedo, Adriana; Eriksson, Mimmi C.; Duan, Tianlin; Tawari, Nilesh et al., 2017 DOI
Early evolution of the land plant circadian clock.
Linde, A., Eklund, D., Kubota, A., Pederson, E., Holm, K. et al. (2017). New Phytologist, vol. 216, ss. 576-590 DOI
Persistent Effects of Developmental Exposure to 17 alpha-Ethinylestradiol on the Zebrafish (Danio rerio) Brain Transcriptome and Behavior.
Porseryd, T., Volkova, K., Caspillo, N., Källman, T., Dinnetz, P. et al. (2017). Frontiers in Behavioral Neuroscience, vol. 11 DOI
Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch.
Salojarvi, J., Smolander, O., Nieminen, K., Rajaraman, S., Safronov, O. et al. (2017). Nature Genetics, . vol. 49, ss. 904-+ DOI
Multispecies genetic structure and hybridization in the Betula genus across Eurasia.
Tsuda, Y., Semerikov, V., Sebastiani, F., Vendramin, G., Lascoux, M. (2017). Molecular Ecology, . vol. 26, ss. 589-605 DOI
Local Adaptation in European Firs Assessed through Extensive Sampling across Altitudinal Gradients in Southern Europe.
Brousseau, L., Postolache, D., Lascoux, M., Drouzas, A., Källman, T. et al. (2016). PLOS ONE, vol. 11 DOI
Identifying Genetic Signatures of Natural Selection Using Pooled Population Sequencing in Picea abies.
Chen, J., Källman, T., Ma, X., Zaina, G., Morgante, M. et al. (2016). G3, vol. 6, ss. 1979-1989 DOI
Introgression maintains the genetic integrity of the mating-type determining chromosome of the fungus Neurospora tetrasperma..
Corcoran, P., Anderson, J., Jacobson, D., Sun, Y., Ni, P. et al. (2016). Genome Research, vol. 26, ss. 486-498 DOI
Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse (Capsella bursa-pastoris).
Cornille, A., Salcedo, A., Kryvokhyzha, D., Glemin, S., Holm, K. et al. (2016). Molecular Ecology, vol. 25, ss. 616-629 DOI
The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae).
Kryvokhyzha, D., Holm, K., Chen, J., Cornille, A., Glemin, S. et al. (2016). Molecular Ecology, vol. 25, ss. 1106-1121 DOI
Local adaptation in plants.
Lascoux, M., Glémin, S., Savolainen, O. (2016). Encyclopedia of Life Sciences . DOI
Different Alleles of a Gene Encoding Leucoanthocyanidin Reductase (PaLAR3) Influence Resistance against the Fungus Heterobasidion parviporum in Picea abies.
Nemesio-Gorriz, M., Hammerbacher, A., Ihrmark, K., Källman, T., Olson, Å. et al. (2016). Plant Physiology, vol. 171, ss. 2671-2681 DOI
GENOMICS Geography matters for Arabidopsis.
Savolainen, O., Lascoux, M. (2016). Nature, vol. 537, ss. 314-315 DOI
The extent and meaning of hybridization and introgression between Siberian spruce (Picea obovata) and Norway spruce (Picea abies): cryptic refugia as stepping stones to the west?.
Tsuda, Y., Chen, J., Stocks, M., Källman, T., Sonstebo, J. et al. (2016). Molecular Ecology, vol. 25, ss. 2773-2789 DOI
An informational transition in conditioned Markov chains: Applied to genetics and evolution.
Zhao, L., Lascoux, M., Waxman, D. (2016). Journal of Theoretical Biology, vol. 402, ss. 158-170 DOI
Hybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris.
Douglas, G., Gos, G., Steige, K., Salcedo, A., Holm, K. et al. (2015). Proceedings of the National Academy of Sciences of the United States of America, vol. 112, ss. 2806-2811 DOI
Genetic and morphological evidence for introgression between three species of willows.
Fogelqvist, J., Verkhozina, A., Katyshev, A., Pucholt, P., Dixelius, C. et al. (2015). BMC Evolutionary Biology, vol. 15 DOI
Population structure and the rate of evolution.
Wei, X., Zhao, L., Lascoux, M., Waxman, D. (2015). Journal of Theoretical Biology, vol. 365, ss. 486-495 DOI
Clinal Variation at Phenology-Related Genes in Spruce: Parallel Evolution in FTL2 and Gigantea?.
Chen, J., Tsuda, Y., Stocks, M., Kallman, T., Xu, N. et al. (2014). Genetics, vol. 197, ss. 1025-1038 DOI
A global multilocus analysis of the model fungus Neurospora reveals a single recent origin of a novel genetic system.
Corcoran, P., Dettman, J., Sun, Y., Luque, E., Corrochano, L. et al. (2014). Molecular Phylogenetics and Evolution, vol. 78, ss. 136-147 DOI
High Rates of Gene Flow by Pollen and Seed in Oak Populations across Europe.
Gerber, S., Chadoeuf, J., Gugerli, F., Lascoux, M., Buiteveld, J. et al. (2014). PLOS ONE, vol. 9, ss. e85130- DOI
No time for spruce: rapid dampening of circadian rhythms in Picea abies (L. Karst).
Gyllenstrand, N., Karlgren, A., Clapham, D., Holm, K., Hall, A. et al. (2014). Plant and Cell Physiology, vol. 55, ss. 535-550 DOI
Perceptions of the Concept of Evolution among Undergraduate Biology Students.
Holm, K. (2014). I EARLI Special Interest Group 9. Phenomenography and Variation Theory, . ss. 15-15 Ladda ner fulltext
Patterns of nucleotide diversity at photoperiod related genes in the conifer Norway spruce [Picea abies (L.) (Karst)].
Källman, T., De Mita, S., Larsson, H., Gyllenstrand, N., Heuertz, M. et al. (2014). PLOS ONE, vol. 9, ss. e95306- DOI
A Picea abies Linkage Map Based on SNP Markers Identifies QTLs for Four Aspects of Resistance to Heterobasidion parviporum Infection.
Lind, M., Kallman, T., Chen, J., Ma, X., Bousquet, J. et al. (2014). PLOS ONE, vol. 9, ss. e101049- DOI
Range shift and introgression of the rear and leading populations in two ecologically distinct Rubus species.
Mimura, M., Mishima, M., Lascoux, M., Yahara, T. (2014). BMC Evolutionary Biology, vol. 14, ss. 209- DOI
Investigating population history using temporal genetic differentiation.
Skoglund, P., Sjödin, P., Skoglund, T., Lascoux, M., Jakobsson, M. (2014). Molecular biology and evolution, vol. 31, ss. 2516-2527 DOI
Amount of information needed for model choice in Approximate Bayesian Computation.
Stocks, M., Siol, M., Lascoux, M., De Mita, S. (2014). PLOS ONE, vol. 9, ss. e99581- DOI
Speciation of two desert poplar species triggered by Pleistocene climatic oscillations.
Wang, J., Källman, T., Liu, J., Guo, Q., Wu, Y. et al. (2014). Heredity, vol. 112, ss. 156-164 DOI
Exact simulation of conditioned Wright-Fisher models.
Zhao, L., Lascoux, M., Waxman, D. (2014). Journal of Theoretical Biology, vol. 363, ss. 419-426 DOI
Origin and demographic history of the endemic Taiwan spruce (Picea morrisonicola).
Bodare, S., Stocks, M., Yang, J., Lascoux, M. (2013). Ecology and Evolution, vol. 3, ss. 3320-3333 DOI
Genetic structure and demographic history of the endangered tree species, Dysoxylum malabaricum (Meliaceae) in Western Ghats, India: Implications for conservation in a biodiversity hotspot.
Bodare, S., Tsuda, Y., Ravikanth, G., Uma Shaanker, R., Lascoux, M. (2013). Ecology and Evolution, vol. 3, ss. 3233-3248 DOI
Conserved function of core clock proteins in the gymnosperm Norway spruce (Picea abies L. Karst).
Karlgren, A., Gyllenstrand, N., Källman, T., Lagercrantz, U. (2013). PLOS ONE, vol. 8, ss. e60110- DOI
Role of vernalization and of duplicated Flowering Locus C in the perennial Arabidopsis lyrata.
Kemi, U., Niittyvuopio, A., Tiovainen, T., Pasanen, A., Quilot-Turion, B. et al. (2013). New Phytologist, vol. 197, ss. 323-335 DOI
A significant fraction of 21-nucleotide small RNA originates from phased degradation of resistance genes in several perennial species.
Källman, T., Chen, J., Gyllenstrand, N., Lagercrantz, U. (2013). Plant Physiology, vol. 162, ss. 741-754 DOI
The HypoMethylated Partial Restriction (HMPR) method reduces the repetitive content of genomic libraries in Norway spruce (Picea abies).
Larsson, H., De Paoli, E., Morgante, M., Lascoux, M., Gyllenstrand, N. (2013). Tree Genetics & Genomes, vol. 9, ss. 601-612 DOI
Distribution of Long-Range Linkage Disequilibrium and Tajima's D Values in Scandinavian Populations of Norway Spruce (Picea abies).
Larsson, H., Kallman, T., Gyllenstrand, N., Lascoux, M. (2013). G3, vol. 3, ss. 795-806 DOI
Genomic insights into salt adaptation in a desert poplar.
Ma, T., Wang, J., Zhou, G., Yue, Z., Hu, Q. et al. (2013). Nature Communications, vol. 4, ss. 2797- DOI
Ecological genomics of local adaptation.
Savolainen, O., Lascoux, M., Merila, J. (2013). Nature reviews genetics, vol. 14, ss. 807-820 DOI
Southern montane populations did not contribute to the recolonization of West Siberian Plain by Siberian larch (Larix sibirica): a range-wide analysis of cytoplasmic markers.
Semerikov, V., Semerikova, S., Polezhaeva, M., Kosintsev, P., Lascoux, M. (2013). Molecular Ecology, vol. 22, ss. 4958-4971 DOI
Rapidly Evolving Genes and Stress Adaptation of Two Desert Poplars, Populus euphratica and P. pruinosa.
Zhang, J., Xie, P., Lascoux, M., Meagher, T., Liu, J. (2013). PLOS ONE, vol. 8, ss. e66370- DOI
The characteristic trajectory of a fixing allele: a consequence of fictitious selection that arises from conditioning.
Zhao, L., Lascoux, M., Overall, A., Waxman, D. (2013). Genetics, vol. 195, ss. 993-1006 DOI
Disentangling the Roles of History and Local Selection in Shaping Clinal Variation of Allele Frequencies and Gene Expression in Norway Spruce (Picea abies).
Chen, J., Källman, T., Ma, X., Gyllenstrand, N., Zaina, G. et al. (2012). Genetics, vol. 191, ss. 865-881 DOI
Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms compared to angiosperms.
Chen, J., Uebbing, S., Gyllenstrand, N., Lagercrantz, U., Lascoux, M. et al. (2012). BMC Genomics, vol. 13, ss. 589- DOI
AFLP analysis to estimate the genetic contribution of parents to progeny from hybridization between Saxifraga sibirica L. and S. cernua L..
Dymshakova, O., Semerikov, V., Lascoux, M. (2012). Russian journal of ecology, vol. 43, ss. 347-351 DOI
Flowering time and transcriptome variation in Capsella bursa-pastoris (Brassicaceae).
Huang, H., Yan, P., Lascoux, M., Ge, X. (2012). New Phytologist, vol. 194, ss. 676-689 DOI
Inferring forest tree population and species histories from genetic variation.
Lascoux, M., Suyama, Y. (2012). I Yoshihisa Suyama (red.) Molecular ecology of forest trees Tokyo: bun-ichi sogo shuppan.
Joint analysis of demography and selection in population genetics: where do we stand and where could we go?.
Li, J., Li, H., Jakobsson, M., Li, S., Sjödin, P. et al. (2012). Molecular Ecology, vol. 21, ss. 28-44 DOI
Population Genetic Evidence for Complex Evolutionary Histories of Four High Altitude Juniper Species in the Qinghai-Tibetan Plateau.
Li, Z., Zou, J., Mao, K., Lin, K., Li, H. et al. (2012). Evolution, vol. 66, ss. 831-845 DOI
Nuclear and cytoplasmic genetic diversity reveals long-term population decline in Abies semenovii, an endemic fir of central Asia.
Semerikova, S., Lascoux, M., Semerikov, V. (2012). Canadian Journal of Forest Research, vol. 42, ss. 2142-2152 DOI
Coalescent-based analysis distinguishes between allo- and autopolyploid origin in shepherd’s purse (Capsella bursa-pastoris).
St Onge, K., Foxe, J., Li, J., Li, H., Holm, K. et al. (2012). Molecular biology and evolution, vol. 29, ss. 1721-1733 DOI
The impact of sampling schemes on demographic inference: an empirical study in two species with different mating systems and demographic histories.
St.Onge, K., Palmé, A., Wright, S., Lascoux, M. (2012). G3, vol. 2, ss. 803-814 DOI
Polymorphism and divergence of two willow species, Salix viminalis L. and Salix schwerinii E. Wolf.
Berlin, S., Fogelqvist, J., Lascoux, M., Lagercrantz, U., Rönnberg-Wästljung, A. (2011). G3, vol. 1, ss. 387-400 DOI
Direction and extent of organelle DNA introgression between two spruce species in the Qinghai-Tibetan Plateau.
Du, F., Peng, X., Liu, J., Lascoux, M., Hu, F. et al. (2011). New Phytologist, vol. 192, ss. 1024-1033 DOI
Patterns of Nucleotide Diversity and Association Mapping.
González-Martínez, S., Dillon, S., Garnier-Géré, P., Krutovsky, K., Alía, R. et al. (2011). I Christophe Plomion (red.) Genetics, Genomics and Breeding of Conifers, Jersey: Science Publishers Inc.. ss. 239-275
Evolution of the PEBP Gene Family in Plants: Functional Diversification in Seed Plant Evolution.
Karlgren, A., Gyllenstrand, N., Källman, T., Sundström, J., Moore, D. et al. (2011). Plant Physiology, vol. 156, ss. 1967-1977 DOI
A sample view of the pedunculate oak (Quercus robur) genome from the sequencing of hypomethylated and random genetic libraries.
Lesur, I., Durand, J., Sebastiani, F., Gyllenstrand, N., Bodénès, C. et al. (2011). Tree Genetics & Genomes, vol. 7, ss. 1277-1285 DOI
The Pleistocene demography of an alpine juniper of the Qinghai-Tibetan Plateau: tabula rasa, cryptic refugia or something else?.
Li, Z., Zhang, Q., Liu, J., Källman, T., Lascoux, M. (2011). Journal of Biogeography, vol. 38, ss. 31-43 DOI
Post-glacial history and introgression in Abies (Pinaceae) species of the Russian Far East inferred from both nuclear and cytoplasmic markers.
Semerikova, S., Semerikov, V., Lascoux, M. (2011). Journal of Biogeography, vol. 38, ss. 326-340 DOI
Contrasting demographic history and population structure in Capsella rubella and Capsella grandiflora, two closely related species with different mating systems.
St.Onge, K., Källman, T., Tanja, S., Lascoux, M., Palmé, A. (2011). Molecular Ecology, vol. 20, ss. 3306-3320 DOI
Genetic Differentiation and Delimitation between Ecologically Diverged Populus euphratica and P. pruinosa.
Wang, J., Wu, Y., Ren, G., Guo, Q., Liu, J. et al. (2011). PLOS ONE, vol. 6, ss. e26530- DOI
Permanent Genetic Resources added to Molecular Ecology Resources Database 1 October 2009-30 November 2009.
An, J., Bechet, A., Berggren, Å., Brown, S., Bruford, M. et al. (2010). Molecular Ecology Resources, vol. 10, ss. 404-408 DOI
Development of eleven microsatellite markers in the red-listed tree species Myristica malabarica.
Hemmilä, S., Kumara, M., Ravikanth, G., Gustafsson, S., Vasudeva, R. et al. (2010). Conservation Genetics Resources, vol. 2, ss. 305-307 DOI
Development of polymorphic microsatellite loci in the endangered tree species Dysoxylum malabaricum.
Hemmilä, Sofia; Mohana Kumara, P.; Ravikanth, G.; Gustafsson, Stefan; Sreejayan, N. et al., 2010
Studies on Natural Variation and Evolution of Photoperiodism in Plants.
Holm, Karl, 2010 Ladda ner fulltext
Does the core circadian clock in the moss Physcomitrella patens (Bryophyta) comprise a single loop?.
Holm, K., Källman, T., Gyllenstrand, N., Hedman, H., Lagercrantz, U. (2010). BMC Plant Biology, vol. 10, ss. 109- DOI
The 'New Wave' in plant demographic inference: more loci and more individuals.
Lascoux, M., Petit, R. (2010). Molecular Ecology, vol. 19, ss. 1075-1078 DOI
Demographic histories of four spruce (Picea) species of the Qinghai-Tibetan Plateau and neighboring areas inferred from multiple nuclear loci.
Li, Y., Stocks, M., Hemmilä, S., Källman, T., Zhu, H. et al. (2010). Molecular biology and evolution, vol. 27, ss. 1001-1014 DOI
Cytoplasmic DNA variation and biogeography of Larix Mill. in Northeast Asia.
Polezhaeva, M., Lascoux, M., Semerikov, V. (2010). Molecular Ecology, vol. 19, ss. 1239-1252 DOI
Introgression and phylogeography of Betula nana (diploid), B-pubescens (tetraploid) and their triploid hybrids in Iceland inferred from cpDNA haplotype variation.
Thorsson, A., Palsson, S., Lascoux, M., Anamthawat-Jonsson, K. (2010). Journal of Biogeography, vol. 37, ss. 2098-2110 DOI
Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck.
Guo, Y., Bechsgaard, J., Slotte, T., Neuffer, B., Lascoux, M. et al. (2009). Proceedings of the National Academy of Sciences of the United States of America, vol. 106, ss. 5246-5251 DOI
Early evolution of the MFT-like gene family in plants.
Hedman, H., Källman, T., Lagercrantz, U. (2009). Plant Molecular Biology, vol. 70, ss. 359-369 DOI
Adaptive Evolution and Demographic History of Norway Spruce (Picea Abies).
Källman, Thomas, 2009 Ladda ner fulltext
Splicing variation at a FLOWERING LOCUS C homeolog is associated with flowering time variation in the tetraploid Capsella bursa-pastoris.
Slotte, T., Huang, H., Holm, K., Ceplitis, A., Onge, K. et al. (2009). Genetics, vol. 183, ss. 337-345 DOI
Past demography in forest trees: what can we learn from nuclear DNA sequences that we do not already know?.
Lascoux, M., Pyhäjärvi, T., Källman, T., Savolainen, O. (2008). Plant Ecology & Diversity, vol. 1, ss. 209-215 DOI
Polymorphism and divergence at three duplicate genes in Brassica nigra.
Sjödin, P., Hedman, H., Kruskopf Österberg, M., Gustafsson, S., Lagercrantz, U. et al. (2008). Journal of Molecular Evolution, vol. 66, ss. 581-590 DOI
Polyploid speciation did not confer instant reproductive isolation in Capsella (Brassicaceae).
Slotte, T., Huang, H., Lascoux, M., Ceplitis, A. (2008). Molecular biology and evolution, vol. 25, ss. 1472-1481 DOI Ladda ner fulltext
A Norway spruce FLOWERING LOCUS T homolog is implicated in control of growth rhythm in conifers.
Gyllenstrand, N., Clapham, D., Källman, T., Lagercrantz, U. (2007). Plant Physiology, vol. 144, ss. 248-257 DOI
Comparative phylogeography and population structure of European Betula species, with particular focus on B. pendula and B. pubescens.
Maliouchenko, O., Palmé, A., buonamici, A., vendramin, G., Lascoux, M. (2007). Journal of Biogeography, vol. 34, ss. 1601-1610 DOI
Mitochondrial DNA variation pattern and postglacial history of the Siberian larch (Larix sibirica Ledeb.).
Semerikov, V., Iroshnikov, A., Lascoux, M. (2007). Russian journal of ecology, vol. 38, ss. 147-154 DOI
Recent degeneration of an old duplicated flowering time gene in Brassica nigra.
Sjödin, P., Hedman, H., Shavorskaya, O., Finet, C., Lascoux, M. et al. (2007). Heredity, vol. 98, ss. 375-384 DOI
Differential expression of genes important for adaptation in Capsella bursa-pastoris (Brassicaceae).
Slotte, T., Holm, K., McIntyre, L., Lagercrantz, U., Lascoux, M. (2007). Plant Physiology, vol. 145, ss. 160-173 DOI
Black mustard.
Das, S., Lagercrantz, U., Lascoux, M. (2006). I Genome mapping and molecular breeding in plants .
On the meaning and existence of an effectve population size.
Sjödin, P., Kaj, I., Krone, S., Lascoux, M., Nordborg, M. (2005). Genetics, vol. 169, ss. 1061-1070
Phylogenetics relationships of Betula species (Betulaceae) based on nuclear ADH and chloroplast MatK sequences.
Jarvinen, P., Palme, A., Morales, L., Lenanpää, M., Kenainen, M. et al. (2004). American Journal of Botany, vol. 91, ss. 1834-1845
Extensive sharing of chloroplast haplotypes among European birches (Betula pendula, B. pubescens and B. nana)..
Palmé, A., Su, Q., Pálsson, S., Lascoux, M. (2004). Molecular Ecology, vol. 13, ss. 167-178
Spatial genetic structure in two congeneric epiphytes with different dispersal strategies analysed by three different methods.
Snäll, T., Fogelqvist, J., Ribeiro Jr., P., Lascoux, M. (2004). Molecular Ecology, vol. 13, ss. 2109-2119
Postglacial recolonization and cpDNA variation of silver birch, Betula pendula.
Palmé, A., Su, Q., Rautenberg, A., Manni, F., Lascoux, M. (2003). Molecular Ecology, vol. 12, ss. 201-212
Glacial Rrefugia: Hotspots but not Melting Pots of Genetic Diversity.
Petit, R., Aguinagalde, I., de Beaulieu, J., Bittkau, C., Brewer, S. et al. (2003). Science, vol. 300, ss. 1563-1565
Genetic mapping of sex-linked markers in Salix viminalis.
Semerikov, V., Lagercrantz, U., Tsahouras, V., Rönnberg-Wästljung, A., Alström-Rapaport, A. et al. (2003). Heredity, vol. 91, ss. 293-299
Nuclear and cytoplasmic variation within and between Eurasian Larix (Pinaceae) species.
Semerikov, V., Lascoux, M. (2003). American Journal of Botany, vol. 90, ss. 1113-1123
Conflicting phylogenies of Larix (Pinaceae) based on cytoplasmic and nuclear DNA.
Semerikov, V., Zhang, H., Sun, M., Lascoux, M. (2003). Molecular Phylogenetics and Evolution, vol. 27, ss. 173-184
Naturally occurring indel variation in the B. nigra COL1 gene is associated with variation in flowering time..
Kruskopf-Österberg, M., Shavorskaya, O., Lascoux, M., Lagercrantz, U. (2002). Genetics, vol. 161, ss. 299-306
Sequence variation and haplotype structure at the putative flowering-time locus COL1 of Brassica nigra.
Lagercrantz, U., Österberg, M., Lascoux, M. (2002). Molecular Biology and Evolution, vol. 19, ss. 1474-1482
Coalescent theory for seed bank models.
Kaj, I., Krone, S., Lascoux, M. (2001). Journal of Applied Probability, vol. 38, ss. 285-300
Genetic diversity and the relative importance of sexual and asexual reproduction in populations of Melampsora epitea..
Samils, B., Lagercrantz, U., Lascoux, M., Gullberg, U. (2001). Eur. J. Plant Path, vol. 107, ss. 871-881
Genetic structure of Melampsora epitea populations in Swedish Salix viminalis populations.
Samils, B., Lagercrantz, U., Lascoux, M., Gullberg, U. (2001). Eur. J. For. Path., vol. 107, ss. 399-404
Probability of identity by descent in metapopulations.
Kaj, I., Lascoux, M. (1999). Genetics, vol. 152, ss. 1217-1228
Recent introductions, ancient recolonization events and local adaptation: a first fine-scale mapping of the population genetic structure of Norway spruce across Sweden.
Li, Lili; Milesi, Pascal; Chen, Jun; Baison, John; Chen, Zhiqiang et al.
Genetic alterations in haemoglobin levels and behaviour in mice selected for high litter size.
Saetre, Peter; Lindberg, Julia; Wirén, Anna; Holm, Karl; Bakken, Morten et al.

Publikationer

Phylogenetic Analysis of Allotetraploid Species Using Polarized Genomic Sequences.
Leal, L., Milesi, P., Salojarvi, J., Lascoux, M. (2023). Systematic Biology, . vol. 72, ss. 372-390 DOI
Teasing apart the joint effect of demography and natural selection in the birth of a contact zone.
Li, L., Milesi, P., Tiret, M., Chen, J., Sendrowski, J. et al. (2022). New Phytologist, . vol. 236, ss. 1976-1987 DOI
How broad is the selfing syndrome? Insights from convergent evolution of gene expression across species and tissues in the Capsella genus.
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Divergent selection predating the Last Glacial Maximum mainly acted on macro‐phenotypes in Norway spruce.
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Expression pattern of resynthesized allotetraploid Capsella is determined by hybridization, not whole genome duplication.
Duan, T., Sicard, A., Glémin, S., Lascoux, M. (2023). New Phytologist, . vol. 237, ss. 339-353 DOI
Genome-wide analyses of introgression between two sympatric Asian oak species.
Fu, R., Zhu, Y., Liu, Y., Feng, Y., Lu, R. et al. (2022). Nature Ecology & Evolution, . vol. 6, ss. 924-+ DOI
Genome-wide evolutionary response of European oaks during the Anthropocene.
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The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe.
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Competitive ability depends on mating system and ploidy level across Capsella species.
Orsucci, M., Yang, X., Vanikiotis, T., Guerrina, M., Duan, T. et al. (2022). Annals of Botany, . vol. 129, ss. 697-708 DOI
What does the distribution of fitness effects of new mutations reflect?: Insights from plants.
Chen, J., Bataillon, T., Glemin, S., Lascoux, M. (2022). New Phytologist, . vol. 233, ss. 1613-1619 DOI
Hunting for Beneficial Mutations: Conditioning on SIFT Scores When Estimating the Distribution of Fitness Effect of New Mutations.
Chen, J., Bataillon, T., Glemin, S., Lascoux, M. (2022). Genome Biology and Evolution, . vol. 14 DOI
An introgressed gene causes meiotic drive in Neurospora sitophila.
Svedberg, J., Vogan, A., Rhoades, N., Sarmarajeewa, D., Jacobson, D. et al. (2021). Proceedings of the National Academy of Sciences of the United States of America, . vol. 118 DOI
The GenTree Leaf Collection: Inter- and intraspecific leaf variation in seven forest tree species in Europe.
Benavides, R., Carvalho, B., Bastias, C., Lopez-Quiroga, D., Mas, A. et al. (2021). Global Ecology and Biogeography, . vol. 30, ss. 590-597 DOI
Leveraging breeding programs and genomic data in Norway spruce (Picea abies L. Karst) for GWAS analysis.
Chen, Z., Zan, Y., Milesi, P., Zhou, L., Chen, J. et al. (2021). Genome Biology, . vol. 22 DOI
The GenTree Platform: growth traits and tree-level environmental data in 12 European forest tree species.
Opgenoorth, L., Benjamin, D., Benavides, R., Heer, K., Alizoti, P. et al. (2021). GigaScience, . vol. 10 DOI
Genomic insights on the contribution of balancing selection and local adaptation to the long-term survival of a widespread living fossil tree,Cercidiphyllum japonicum.
Zhu, S., Chen, J., Zhao, J., Comes, H., Li, P. et al. (2020). New Phytologist, . vol. 228, ss. 1674-1689 DOI
Genetics to the rescue: managing forests sustainably in a changing world.
Fady, B., Aravanopoulos, F., Benavides, R., Gonzalez-Martinez, S., Grivet, D. et al. (2020). Tree Genetics & Genomes, . vol. 16 DOI
Survival in the Tropics despite isolation, inbreeding and asexual reproduction: insights from the genome of the world's southernmost poplar (Populus ilicifolia).
Chen, Z., Ai, F., Zhang, J., Ma, X., Yang, W. et al. (2020). The Plant Journal, vol. 103, ss. 430-442 DOI
Cytoplasmic DNA variation does not support a recent contribution of Pinus sylvestris L. from the Caucasus to the main range.
Semerikov, N., Petrova, I., Sannikov, S., Semerikova, S., Tashev, A. et al. (2020). Tree Genetics & Genomes, . vol. 16 DOI
Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load.
Orsucci, M., Milesi, P., Hansen, J., Girodolle, J., Glémin, S. et al. (2020). Proceedings of the Royal Society of London. Biological Sciences, vol. 287 DOI
From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?.
Chen, J., Glemin, S., Lascoux, M. (2020). Genetics, . vol. 214, ss. 1005-1018 DOI
Allorecognition genes drive reproductive isolation in Podospora anserina.
Ament-Velásquez, S., Vogan, A., Granger-Farbos, A., Bastiaans, E., Martinossi-Allibert, I. et al. (2022). Nature Ecology & Evolution, . vol. 6, ss. 910-923 DOI
The GenTree Dendroecological Collection, tree-ring and wood density data from seven tree species across Europe.
Martinez-Sancho, E., Slamova, L., Morganti, S., Grefen, C., Carvalho, B. et al. (2020). Scientific Data, . vol. 7 DOI
Recent introductions, ancient recolonization events and local adaptation: a first fine-scale mapping of the population genetic structure of Norway spruce across Sweden.
Li, Lili; Milesi, Pascal; Chen, Jun; Baison, John; Chen, Zhiqiang et al.
Clinal variation in growth cessation and FTL2 expression in Siberian spruce.
Li, L., Chen, J., Lascoux, M. (2019). Tree Genetics & Genomes, vol. 15 DOI
Assessing the potential for assisted gene flow using past introduction of Norway spruce in southern Sweden: Local adaptation and genetic basis of quantitative traits in trees.
Milesi, P., Berlin, M., Chen, J., Orsucci, M., Li, L. et al. (2019). Evolutionary Applications, . vol. 12, ss. 1946-1959 DOI
Genomic data provide new insights on the demographic history and the extent of recent material transfers in Norway spruce.
Chen, J., Li, L., Milesi, P., Jansson, G., Berlin, M. et al. (2019). Evolutionary Applications, . vol. 12, ss. 1539-1551 DOI
Towards the new normal: Transcriptomic convergence and genomic legacy of the two subgenomes of an allopolyploid weed (Capsella bursa-pastoris).
Kryvokhyzha, D., Milesi, P., Duan, T., Orsucci, M., Wright, S. et al. (2019). PLOS Genetics, . vol. 15 DOI
Analysis of diversity-dependent species evolution using concepts in population genetics.
Kaj, I., Glémin, S., Tahir, D., Lascoux, M. (2021). Journal of Mathematical Biology, vol. 82 DOI
Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae).
Kryvokhyzha, D., Salcedo, A., Eriksson, M., Duan, T., Tawari, N. et al. (2019). PLOS Genetics, vol. 15 DOI
Modeling a trait-dependent diversification process coupled with molecular evolution on a random species tree.
Tahir, D., Glemin, S., Lascoux, M., Kaj, I. (2019). Journal of Theoretical Biology, vol. 461, ss. 189-203 DOI
Convergent evolution of complex genomic rearrangements in two fungal meiotic drive elements.
Svedberg, J., Hosseini, S., Chen, J., Vogan, A., Mozgova, I. et al. (2018). Nature Communications, . vol. 9 DOI
Oak genome reveals facets of long lifespan.
Plomion, C., Aury, J., Amselem, J., Leroy, T., Murat, F. et al. (2018). NATURE PLANTS, vol. 4 4, ss. 440 440-452 452 DOI
Homeologue-specific expression divergence in the recently formed tetraploid Capsella bursa-pastoris (Brassicaceae).
Huang, H., Liu, J., Xu, Y., Lascoux, M., Ge, X. et al. (2018). New Phytologist, vol. 220, ss. 624-635 DOI
Demographic expansion and genetic load of the halophyte model plant Eutrema salsugineum.
Wang, X., Hu, Q., Guo, X., Wang, K., Ru, D. et al. (2018). Molecular Ecology, . vol. 27, ss. 2943-2955 DOI
Paternally expressed imprinted genes associate with hybridization barriers in Capsella.
Lafon-Placette, C., Hatorangan, M., Steige, K., Cornille, A., Lascoux, M. et al. (2018). NATURE PLANTS, . vol. 4 4, ss. 352 352-357 357 DOI
Competitive ability of Capsella species with different mating systems and ploidy levels.
Mendoza, S., Lascoux, M., Glemin, S. (2018). Annals of Botany, vol. 121, ss. 1257-1264 DOI
From America to Eurasia: a multigenomes history of the genus Abies.
Semerikova, S., Khrunyk, Y., Lascoux, M., Semerikov, V. (2018). Molecular Phylogenetics and Evolution, . vol. 125, ss. 14-28 DOI
Ancient polymorphisms and divergence hitchhiking contribute to genomic islands of divergence within a poplar species complex.
Ma, T., Wang, K., Hu, Q., Xi, Z., Wan, D. et al. (2018). Proceedings of the National Academy of Sciences of the United States of America, . vol. 115, ss. E236-E243 DOI
Parental legacy, demography, and introgression influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae).
Kryvokhyzha, Dmytro; Salcedo, Adriana; Eriksson, Mimmi C.; Duan, Tianlin; Tawari, Nilesh et al., 2017 DOI
Using the Ornstein-Uhlenbeck process to model the evolution of interacting populations.
Bartoszek, K., Glemin, S., Kaj, I., Lascoux, M. (2017). Journal of Theoretical Biology, vol. 429, ss. 35-45 DOI
Genome sequencing and population genomic analyses provide insights into the adaptive landscape of silver birch.
Salojarvi, J., Smolander, O., Nieminen, K., Rajaraman, S., Safronov, O. et al. (2017). Nature Genetics, . vol. 49, ss. 904-+ DOI
Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species.
Chen, J., Glemin, S., Lascoux, M. (2017). Molecular biology and evolution, . vol. 34, ss. 1417-1428 DOI
Fine- and local- scale genetic structure of Dysoxylum malabaricum, a late-successional canopy tree species in disturbed forest patches in the Western Ghats, India.
Bodare, S., Ravikanth, G., Ismail, S., Patel, M., Spanu, I. et al. (2017). Conservation Genetics, . vol. 18, ss. 1-15 DOI
A new Eurasian phylogeographical paradigm?: Limited contribution of southern populations to the recolonization of high latitude populations in Juniperus communis L.(Cupressaceae).
Hantemirova, E., Heinze, B., Knyazeva, S., Musaev, A., Lascoux, M. et al. (2017). Journal of Biogeography, vol. 44, ss. 271-282 DOI
Multispecies genetic structure and hybridization in the Betula genus across Eurasia.
Tsuda, Y., Semerikov, V., Sebastiani, F., Vendramin, G., Lascoux, M. (2017). Molecular Ecology, . vol. 26, ss. 589-605 DOI
Local adaptation in plants.
Lascoux, M., Glémin, S., Savolainen, O. (2016). Encyclopedia of Life Sciences . DOI
GENOMICS Geography matters for Arabidopsis.
Savolainen, O., Lascoux, M. (2016). Nature, vol. 537, ss. 314-315 DOI
Different Alleles of a Gene Encoding Leucoanthocyanidin Reductase (PaLAR3) Influence Resistance against the Fungus Heterobasidion parviporum in Picea abies.
Nemesio-Gorriz, M., Hammerbacher, A., Ihrmark, K., Källman, T., Olson, Å. et al. (2016). Plant Physiology, vol. 171, ss. 2671-2681 DOI
Local Adaptation in European Firs Assessed through Extensive Sampling across Altitudinal Gradients in Southern Europe.
Brousseau, L., Postolache, D., Lascoux, M., Drouzas, A., Källman, T. et al. (2016). PLOS ONE, vol. 11 DOI
Identifying Genetic Signatures of Natural Selection Using Pooled Population Sequencing in Picea abies.
Chen, J., Källman, T., Ma, X., Zaina, G., Morgante, M. et al. (2016). G3, vol. 6, ss. 1979-1989 DOI
The extent and meaning of hybridization and introgression between Siberian spruce (Picea obovata) and Norway spruce (Picea abies): cryptic refugia as stepping stones to the west?.
Tsuda, Y., Chen, J., Stocks, M., Källman, T., Sonstebo, J. et al. (2016). Molecular Ecology, vol. 25, ss. 2773-2789 DOI
An informational transition in conditioned Markov chains: Applied to genetics and evolution.
Zhao, L., Lascoux, M., Waxman, D. (2016). Journal of Theoretical Biology, vol. 402, ss. 158-170 DOI
The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae).
Kryvokhyzha, D., Holm, K., Chen, J., Cornille, A., Glemin, S. et al. (2016). Molecular Ecology, vol. 25, ss. 1106-1121 DOI
Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse (Capsella bursa-pastoris).
Cornille, A., Salcedo, A., Kryvokhyzha, D., Glemin, S., Holm, K. et al. (2016). Molecular Ecology, vol. 25, ss. 616-629 DOI
Introgression maintains the genetic integrity of the mating-type determining chromosome of the fungus Neurospora tetrasperma..
Corcoran, P., Anderson, J., Jacobson, D., Sun, Y., Ni, P. et al. (2016). Genome Research, vol. 26, ss. 486-498 DOI
Genetic and morphological evidence for introgression between three species of willows.
Fogelqvist, J., Verkhozina, A., Katyshev, A., Pucholt, P., Dixelius, C. et al. (2015). BMC Evolutionary Biology, vol. 15 DOI
Hybrid origins and the earliest stages of diploidization in the highly successful recent polyploid Capsella bursa-pastoris.
Douglas, G., Gos, G., Steige, K., Salcedo, A., Holm, K. et al. (2015). Proceedings of the National Academy of Sciences of the United States of America, vol. 112, ss. 2806-2811 DOI
Exact simulation of conditioned Wright-Fisher models.
Zhao, L., Lascoux, M., Waxman, D. (2014). Journal of Theoretical Biology, vol. 363, ss. 419-426 DOI
Population structure and the rate of evolution.
Wei, X., Zhao, L., Lascoux, M., Waxman, D. (2015). Journal of Theoretical Biology, vol. 365, ss. 486-495 DOI
Range shift and introgression of the rear and leading populations in two ecologically distinct Rubus species.
Mimura, M., Mishima, M., Lascoux, M., Yahara, T. (2014). BMC Evolutionary Biology, vol. 14, ss. 209- DOI
A Picea abies Linkage Map Based on SNP Markers Identifies QTLs for Four Aspects of Resistance to Heterobasidion parviporum Infection.
Lind, M., Kallman, T., Chen, J., Ma, X., Bousquet, J. et al. (2014). PLOS ONE, vol. 9, ss. e101049- DOI
Clinal Variation at Phenology-Related Genes in Spruce: Parallel Evolution in FTL2 and Gigantea?.
Chen, J., Tsuda, Y., Stocks, M., Kallman, T., Xu, N. et al. (2014). Genetics, vol. 197, ss. 1025-1038 DOI
Speciation of two desert poplar species triggered by Pleistocene climatic oscillations.
Wang, J., Källman, T., Liu, J., Guo, Q., Wu, Y. et al. (2014). Heredity, vol. 112, ss. 156-164 DOI
High Rates of Gene Flow by Pollen and Seed in Oak Populations across Europe.
Gerber, S., Chadoeuf, J., Gugerli, F., Lascoux, M., Buiteveld, J. et al. (2014). PLOS ONE, vol. 9, ss. e85130- DOI
Genomic insights into salt adaptation in a desert poplar.
Ma, T., Wang, J., Zhou, G., Yue, Z., Hu, Q. et al. (2013). Nature Communications, vol. 4, ss. 2797- DOI
The characteristic trajectory of a fixing allele: a consequence of fictitious selection that arises from conditioning.
Zhao, L., Lascoux, M., Overall, A., Waxman, D. (2013). Genetics, vol. 195, ss. 993-1006 DOI
Ecological genomics of local adaptation.
Savolainen, O., Lascoux, M., Merila, J. (2013). Nature reviews genetics, vol. 14, ss. 807-820 DOI
Southern montane populations did not contribute to the recolonization of West Siberian Plain by Siberian larch (Larix sibirica): a range-wide analysis of cytoplasmic markers.
Semerikov, V., Semerikova, S., Polezhaeva, M., Kosintsev, P., Lascoux, M. (2013). Molecular Ecology, vol. 22, ss. 4958-4971 DOI
A global multilocus analysis of the model fungus Neurospora reveals a single recent origin of a novel genetic system.
Corcoran, P., Dettman, J., Sun, Y., Luque, E., Corrochano, L. et al. (2014). Molecular Phylogenetics and Evolution, vol. 78, ss. 136-147 DOI
Amount of information needed for model choice in Approximate Bayesian Computation.
Stocks, M., Siol, M., Lascoux, M., De Mita, S. (2014). PLOS ONE, vol. 9, ss. e99581- DOI
Investigating population history using temporal genetic differentiation.
Skoglund, P., Sjödin, P., Skoglund, T., Lascoux, M., Jakobsson, M. (2014). Molecular biology and evolution, vol. 31, ss. 2516-2527 DOI
Rapidly Evolving Genes and Stress Adaptation of Two Desert Poplars, Populus euphratica and P. pruinosa.
Zhang, J., Xie, P., Lascoux, M., Meagher, T., Liu, J. (2013). PLOS ONE, vol. 8, ss. e66370- DOI
Distribution of Long-Range Linkage Disequilibrium and Tajima's D Values in Scandinavian Populations of Norway Spruce (Picea abies).
Larsson, H., Kallman, T., Gyllenstrand, N., Lascoux, M. (2013). G3, vol. 3, ss. 795-806 DOI
Genetic structure and demographic history of the endangered tree species, Dysoxylum malabaricum (Meliaceae) in Western Ghats, India: Implications for conservation in a biodiversity hotspot.
Bodare, S., Tsuda, Y., Ravikanth, G., Uma Shaanker, R., Lascoux, M. (2013). Ecology and Evolution, vol. 3, ss. 3233-3248 DOI
Origin and demographic history of the endemic Taiwan spruce (Picea morrisonicola).
Bodare, S., Stocks, M., Yang, J., Lascoux, M. (2013). Ecology and Evolution, vol. 3, ss. 3320-3333 DOI
Nuclear and cytoplasmic genetic diversity reveals long-term population decline in Abies semenovii, an endemic fir of central Asia.
Semerikova, S., Lascoux, M., Semerikov, V. (2012). Canadian Journal of Forest Research, vol. 42, ss. 2142-2152 DOI
AFLP analysis to estimate the genetic contribution of parents to progeny from hybridization between Saxifraga sibirica L. and S. cernua L..
Dymshakova, O., Semerikov, V., Lascoux, M. (2012). Russian journal of ecology, vol. 43, ss. 347-351 DOI
The HypoMethylated Partial Restriction (HMPR) method reduces the repetitive content of genomic libraries in Norway spruce (Picea abies).
Larsson, H., De Paoli, E., Morgante, M., Lascoux, M., Gyllenstrand, N. (2013). Tree Genetics & Genomes, vol. 9, ss. 601-612 DOI
Patterns of nucleotide diversity at photoperiod related genes in the conifer Norway spruce [Picea abies (L.) (Karst)].
Källman, T., De Mita, S., Larsson, H., Gyllenstrand, N., Heuertz, M. et al. (2014). PLOS ONE, vol. 9, ss. e95306- DOI
Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms compared to angiosperms.
Chen, J., Uebbing, S., Gyllenstrand, N., Lagercrantz, U., Lascoux, M. et al. (2012). BMC Genomics, vol. 13, ss. 589- DOI
Disentangling the Roles of History and Local Selection in Shaping Clinal Variation of Allele Frequencies and Gene Expression in Norway Spruce (Picea abies).
Chen, J., Källman, T., Ma, X., Gyllenstrand, N., Zaina, G. et al. (2012). Genetics, vol. 191, ss. 865-881 DOI
Flowering time and transcriptome variation in Capsella bursa-pastoris (Brassicaceae).
Huang, H., Yan, P., Lascoux, M., Ge, X. (2012). New Phytologist, vol. 194, ss. 676-689 DOI
Population Genetic Evidence for Complex Evolutionary Histories of Four High Altitude Juniper Species in the Qinghai-Tibetan Plateau.
Li, Z., Zou, J., Mao, K., Lin, K., Li, H. et al. (2012). Evolution, vol. 66, ss. 831-845 DOI
Inferring forest tree population and species histories from genetic variation.
Lascoux, M., Suyama, Y. (2012). I Yoshihisa Suyama (red.) Molecular ecology of forest trees Tokyo: bun-ichi sogo shuppan.
Joint analysis of demography and selection in population genetics: where do we stand and where could we go?.
Li, J., Li, H., Jakobsson, M., Li, S., Sjödin, P. et al. (2012). Molecular Ecology, vol. 21, ss. 28-44 DOI
A sample view of the pedunculate oak (Quercus robur) genome from the sequencing of hypomethylated and random genetic libraries.
Lesur, I., Durand, J., Sebastiani, F., Gyllenstrand, N., Bodénès, C. et al. (2011). Tree Genetics & Genomes, vol. 7, ss. 1277-1285 DOI
Patterns of Nucleotide Diversity and Association Mapping.
González-Martínez, S., Dillon, S., Garnier-Géré, P., Krutovsky, K., Alía, R. et al. (2011). I Christophe Plomion (red.) Genetics, Genomics and Breeding of Conifers, Jersey: Science Publishers Inc.. ss. 239-275
Polymorphism and divergence of two willow species, Salix viminalis L. and Salix schwerinii E. Wolf.
Berlin, S., Fogelqvist, J., Lascoux, M., Lagercrantz, U., Rönnberg-Wästljung, A. (2011). G3, vol. 1, ss. 387-400 DOI
Direction and extent of organelle DNA introgression between two spruce species in the Qinghai-Tibetan Plateau.
Du, F., Peng, X., Liu, J., Lascoux, M., Hu, F. et al. (2011). New Phytologist, vol. 192, ss. 1024-1033 DOI
Genetic Differentiation and Delimitation between Ecologically Diverged Populus euphratica and P. pruinosa.
Wang, J., Wu, Y., Ren, G., Guo, Q., Liu, J. et al. (2011). PLOS ONE, vol. 6, ss. e26530- DOI
Evolution of the PEBP Gene Family in Plants: Functional Diversification in Seed Plant Evolution.
Karlgren, A., Gyllenstrand, N., Källman, T., Sundström, J., Moore, D. et al. (2011). Plant Physiology, vol. 156, ss. 1967-1977 DOI
Post-glacial history and introgression in Abies (Pinaceae) species of the Russian Far East inferred from both nuclear and cytoplasmic markers.
Semerikova, S., Semerikov, V., Lascoux, M. (2011). Journal of Biogeography, vol. 38, ss. 326-340 DOI
The Pleistocene demography of an alpine juniper of the Qinghai-Tibetan Plateau: tabula rasa, cryptic refugia or something else?.
Li, Z., Zhang, Q., Liu, J., Källman, T., Lascoux, M. (2011). Journal of Biogeography, vol. 38, ss. 31-43 DOI
Coalescent-based analysis distinguishes between allo- and autopolyploid origin in shepherd’s purse (Capsella bursa-pastoris).
St Onge, K., Foxe, J., Li, J., Li, H., Holm, K. et al. (2012). Molecular biology and evolution, vol. 29, ss. 1721-1733 DOI
The impact of sampling schemes on demographic inference: an empirical study in two species with different mating systems and demographic histories.
St.Onge, K., Palmé, A., Wright, S., Lascoux, M. (2012). G3, vol. 2, ss. 803-814 DOI
Contrasting demographic history and population structure in Capsella rubella and Capsella grandiflora, two closely related species with different mating systems.
St.Onge, K., Källman, T., Tanja, S., Lascoux, M., Palmé, A. (2011). Molecular Ecology, vol. 20, ss. 3306-3320 DOI
Introgression and phylogeography of Betula nana (diploid), B-pubescens (tetraploid) and their triploid hybrids in Iceland inferred from cpDNA haplotype variation.
Thorsson, A., Palsson, S., Lascoux, M., Anamthawat-Jonsson, K. (2010). Journal of Biogeography, vol. 37, ss. 2098-2110 DOI
Development of polymorphic microsatellite loci in the endangered tree species Dysoxylum malabaricum.
Hemmilä, Sofia; Mohana Kumara, P.; Ravikanth, G.; Gustafsson, Stefan; Sreejayan, N. et al., 2010
Development of eleven microsatellite markers in the red-listed tree species Myristica malabarica.
Hemmilä, S., Kumara, M., Ravikanth, G., Gustafsson, S., Vasudeva, R. et al. (2010). Conservation Genetics Resources, vol. 2, ss. 305-307 DOI
Past demography in forest trees: what can we learn from nuclear DNA sequences that we do not already know?.
Lascoux, M., Pyhäjärvi, T., Källman, T., Savolainen, O. (2008). Plant Ecology & Diversity, vol. 1, ss. 209-215 DOI
Demographic histories of four spruce (Picea) species of the Qinghai-Tibetan Plateau and neighboring areas inferred from multiple nuclear loci.
Li, Y., Stocks, M., Hemmilä, S., Källman, T., Zhu, H. et al. (2010). Molecular biology and evolution, vol. 27, ss. 1001-1014 DOI
Cytoplasmic DNA variation and biogeography of Larix Mill. in Northeast Asia.
Polezhaeva, M., Lascoux, M., Semerikov, V. (2010). Molecular Ecology, vol. 19, ss. 1239-1252 DOI
The 'New Wave' in plant demographic inference: more loci and more individuals.
Lascoux, M., Petit, R. (2010). Molecular Ecology, vol. 19, ss. 1075-1078 DOI
Permanent Genetic Resources added to Molecular Ecology Resources Database 1 October 2009-30 November 2009.
An, J., Bechet, A., Berggren, Å., Brown, S., Bruford, M. et al. (2010). Molecular Ecology Resources, vol. 10, ss. 404-408 DOI
Splicing variation at a FLOWERING LOCUS C homeolog is associated with flowering time variation in the tetraploid Capsella bursa-pastoris.
Slotte, T., Huang, H., Holm, K., Ceplitis, A., Onge, K. et al. (2009). Genetics, vol. 183, ss. 337-345 DOI
Polymorphism and divergence at three duplicate genes in Brassica nigra.
Sjödin, P., Hedman, H., Kruskopf Österberg, M., Gustafsson, S., Lagercrantz, U. et al. (2008). Journal of Molecular Evolution, vol. 66, ss. 581-590 DOI
Recent speciation of Capsella rubella from Capsella grandiflora, associated with loss of self-incompatibility and an extreme bottleneck.
Guo, Y., Bechsgaard, J., Slotte, T., Neuffer, B., Lascoux, M. et al. (2009). Proceedings of the National Academy of Sciences of the United States of America, vol. 106, ss. 5246-5251 DOI
Polyploid speciation did not confer instant reproductive isolation in Capsella (Brassicaceae).
Slotte, T., Huang, H., Lascoux, M., Ceplitis, A. (2008). Molecular biology and evolution, vol. 25, ss. 1472-1481 DOI Ladda ner fulltext
Mitochondrial DNA variation pattern and postglacial history of the Siberian larch (Larix sibirica Ledeb.).
Semerikov, V., Iroshnikov, A., Lascoux, M. (2007). Russian journal of ecology, vol. 38, ss. 147-154 DOI
Recent degeneration of an old duplicated flowering time gene in Brassica nigra.
Sjödin, P., Hedman, H., Shavorskaya, O., Finet, C., Lascoux, M. et al. (2007). Heredity, vol. 98, ss. 375-384 DOI
Comparative phylogeography and population structure of European Betula species, with particular focus on B. pendula and B. pubescens.
Maliouchenko, O., Palmé, A., buonamici, A., vendramin, G., Lascoux, M. (2007). Journal of Biogeography, vol. 34, ss. 1601-1610 DOI
Differential expression of genes important for adaptation in Capsella bursa-pastoris (Brassicaceae).
Slotte, T., Holm, K., McIntyre, L., Lagercrantz, U., Lascoux, M. (2007). Plant Physiology, vol. 145, ss. 160-173 DOI
Spatial genetic structure in two congeneric epiphytes with different dispersal strategies analysed by three different methods.
Snäll, T., Fogelqvist, J., Ribeiro Jr., P., Lascoux, M. (2004). Molecular Ecology, vol. 13, ss. 2109-2119
On the meaning and existence of an effectve population size.
Sjödin, P., Kaj, I., Krone, S., Lascoux, M., Nordborg, M. (2005). Genetics, vol. 169, ss. 1061-1070
Conflicting phylogenies of Larix (Pinaceae) based on cytoplasmic and nuclear DNA.
Semerikov, V., Zhang, H., Sun, M., Lascoux, M. (2003). Molecular Phylogenetics and Evolution, vol. 27, ss. 173-184
Nuclear and cytoplasmic variation within and between Eurasian Larix (Pinaceae) species.
Semerikov, V., Lascoux, M. (2003). American Journal of Botany, vol. 90, ss. 1113-1123
Genetic diversity and the relative importance of sexual and asexual reproduction in populations of Melampsora epitea..
Samils, B., Lagercrantz, U., Lascoux, M., Gullberg, U. (2001). Eur. J. Plant Path, vol. 107, ss. 871-881
Genetic mapping of sex-linked markers in Salix viminalis.
Semerikov, V., Lagercrantz, U., Tsahouras, V., Rönnberg-Wästljung, A., Alström-Rapaport, A. et al. (2003). Heredity, vol. 91, ss. 293-299
Glacial Rrefugia: Hotspots but not Melting Pots of Genetic Diversity.
Petit, R., Aguinagalde, I., de Beaulieu, J., Bittkau, C., Brewer, S. et al. (2003). Science, vol. 300, ss. 1563-1565
Postglacial recolonization and cpDNA variation of silver birch, Betula pendula.
Palmé, A., Su, Q., Rautenberg, A., Manni, F., Lascoux, M. (2003). Molecular Ecology, vol. 12, ss. 201-212
Extensive sharing of chloroplast haplotypes among European birches (Betula pendula, B. pubescens and B. nana)..
Palmé, A., Su, Q., Pálsson, S., Lascoux, M. (2004). Molecular Ecology, vol. 13, ss. 167-178
Probability of identity by descent in metapopulations.
Kaj, I., Lascoux, M. (1999). Genetics, vol. 152, ss. 1217-1228
Coalescent theory for seed bank models.
Kaj, I., Krone, S., Lascoux, M. (2001). Journal of Applied Probability, vol. 38, ss. 285-300
Phylogenetics relationships of Betula species (Betulaceae) based on nuclear ADH and chloroplast MatK sequences.
Jarvinen, P., Palme, A., Morales, L., Lenanpää, M., Kenainen, M. et al. (2004). American Journal of Botany, vol. 91, ss. 1834-1845
Genetic structure of Melampsora epitea populations in Swedish Salix viminalis populations.
Samils, B., Lagercrantz, U., Lascoux, M., Gullberg, U. (2001). Eur. J. For. Path., vol. 107, ss. 399-404
Sequence variation and haplotype structure at the putative flowering-time locus COL1 of Brassica nigra.
Lagercrantz, U., Österberg, M., Lascoux, M. (2002). Molecular Biology and Evolution, vol. 19, ss. 1474-1482
Naturally occurring indel variation in the B. nigra COL1 gene is associated with variation in flowering time..
Kruskopf-Österberg, M., Shavorskaya, O., Lascoux, M., Lagercrantz, U. (2002). Genetics, vol. 161, ss. 299-306
Black mustard.
Das, S., Lagercrantz, U., Lascoux, M. (2006). I Genome mapping and molecular breeding in plants .

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