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Department of Ecology and Genetics

Lagercrantz Group

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Uppsala University Department of Ecology ... Plant Ecology and ... Lagercrantz Group Publications
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Lagercrantz Group

  • Ongoing research
  • Publications
  • People

Publications

  • The Physcomitrium patens egg cell expresses several distinct epigenetic components and utilizes homologues of BONOBO genes for cell specification.

    Sanchez-Vera, V., Landberg, K., Lopez-Obando, M., Thelander, M., Lagercrantz, U. et al. (2022). New Phytologist, . vol. 233, ss. 2614-2628 DOI
  • PIF-independent regulation of growth by an evening complex in the liverwort Marchantia polymorpha.

    Lagercrantz, U., Billhardt, A., Rousku, S., Landberg, K., Thelander, M. et al. (2022). PLOS ONE, . vol. 17 DOI
  • DE‐ETIOLATED1 has a role in the circadian clock of the liverwort Marchantia polymorpha.

    Lagercrantz, U., Billhardt, A., Rousku, S., Leso, M., Reza, S. et al. (2021). New Phytologist, vol. 232, ss. 595-609 DOI
  • Rates and patterns of molecular evolution in bryophyte genomes, with focus on complex thalloid liverworts, Marchantiopsida.

    Linde, A., Eklund, D., Cronberg, N., Bowman, J., Lagercrantz, U. (2021). Molecular Phylogenetics and Evolution, . vol. 165 DOI
  • An ancestral signalling pathway is conserved in intracellular symbioses-forming plant lineages.

    Radhakrishnan, G., Keller, J., Rich, M., Vernie, T., Mbadinga Mbadinga, D. et al. (2020). NATURE PLANTS, . vol. 6, ss. 280-289 DOI
  • Evolutionary History of the Marchantia polymorpha Complex.

    Linde, A., Sawangproh, W., Cronberg, N., Szoevenyi, P., Lagercrantz, U. (2020). Frontiers in Plant Science, . vol. 11 DOI
  • Nyctinastic thallus movement in the liverwort Marchantia polymorpha is regulated by a circadian clock.

    Lagercrantz, U., Billhardt, A., Rousku, S., Ljung, K., Eklund, D. (2020). Scientific Reports, vol. 10 DOI
  • Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae).

    Kryvokhyzha, D., Salcedo, A., Eriksson, M., Duan, T., Tawari, N. et al. (2019). PLOS Genetics, vol. 15 DOI
  • An Evolutionarily Conserved Abscisic Acid Signaling Pathway Regulates Dormancy in the Liverwort Marchantia polymorpha.

    Eklund, D., Kanei, M., Flores-Sandoval, E., Ishizaki, K., Nishihama, R. et al. (2018). Current Biology, . vol. 28, ss. 3691-3699.e3 DOI
  • Insights into Land Plant Evolution Garnered from the Marchantia polymorpha Genome.

    Bowman, J., Kohchi, T., Yamato, K., Jenkins, J., Shu, S. et al. (2017). Cell, vol. 171, ss. 287-304.15 DOI
  • Early evolution of the land plant circadian clock.

    Linde, A., Eklund, D., Kubota, A., Pederson, E., Holm, K. et al. (2017). New Phytologist, vol. 216, ss. 576-590 DOI
  • Association mapping in Salix viminalis L. (Salicaceae) - identification of candidate genes associated with growth and phenology.

    Hallingback, H., Fogelqvist, J., Powers, S., Turrion-Gomez, J., Rossiter, R. et al. (2016). Global Change Biology Bioenergy, vol. 8, ss. 670-685 DOI
  • The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae).

    Kryvokhyzha, D., Holm, K., Chen, J., Cornille, A., Glemin, S. et al. (2016). Molecular Ecology, vol. 25, ss. 1106-1121 DOI
  • Auxin Produced by the Indole-3-Pyruvic Acid Pathway Regulates Development and Gemmae Dormancy in the Liverwort Marchantia polymorph.

    Eklund, D., Ishizaki, K., Flores-Sandoval, E., Kikuchi, S., Takebayashi, Y. et al. (2015). The Plant Cell, vol. 27, ss. 1650-1669 DOI
  • Neofunctionalization of Duplicated Tic40 Genes Caused a Gain-of-Function Variation Related to Male Fertility in Brassica oleracea Lineages.

    Dun, X., Shen, W., Hu, K., Zhou, Z., Xia, S. et al. (2014). Plant Physiology, vol. 166, ss. 1403-1419 DOI
  • Genetic diversity, population structure and phenotypic variation in European Salix viminalis L. (Salicaceae).

    Berlin, S., Trybush, S., Fogelqvist, J., Gyllenstrand, N., Hallingbaeck, H. et al. (2014). Tree Genetics & Genomes, vol. 10, ss. 1595-1610 DOI
  • Association of FLOWERING LOCUS T/TERMINAL FLOWER 1-like gene FTL2 expression with growth rhythm in Scots pine (Pinus sylvestris).

    Avia, K., Karkkainen, K., Lagercrantz, U., Savolainen, O. (2014). New Phytologist, vol. 204, ss. 159-170 DOI
  • Genetic architecture of spring and autumn phenology in Salix.

    Ghelardini, L., Berlin, S., Weih, M., Lagercrantz, U., Gyllenstrand, N. et al. (2014). BMC Plant Biology, vol. 14, ss. 31- DOI
  • A significant fraction of 21-nucleotide small RNA originates from phased degradation of resistance genes in several perennial species.

    Källman, T., Chen, J., Gyllenstrand, N., Lagercrantz, U. (2013). Plant Physiology, vol. 162, ss. 741-754 DOI
  • Photoperiodic control of bud set and FTL2 expression in a tropical spruce species  (Picea morrisonicola).

    Bodare, Sofia; Källman, Thomas; Lascoux, Martin; Lagercrantz, Ulf
  • No time for spruce: rapid dampening of circadian rhythms in Picea abies (L. Karst).

    Gyllenstrand, N., Karlgren, A., Clapham, D., Holm, K., Hall, A. et al. (2014). Plant and Cell Physiology, vol. 55, ss. 535-550 DOI
  • Conserved function of core clock proteins in the gymnosperm Norway spruce (Picea abies L. Karst).

    Karlgren, A., Gyllenstrand, N., Källman, T., Lagercrantz, U. (2013). PLOS ONE, vol. 8, ss. e60110- DOI
  • FLOWERING LOCUS T/TERMINAL FLOWER1-Like Genes Affect Growth Rhythm and Bud Set in Norway Spruce.

    Karlgren, A., Gyllenstrand, N., Clapham, D., Lagercrantz, U. (2013). Plant Physiology, vol. 163, ss. 792-803 DOI
  • Role of vernalization and of duplicated Flowering Locus C in the perennial Arabidopsis lyrata.

    Kemi, U., Niittyvuopio, A., Tiovainen, T., Pasanen, A., Quilot-Turion, B. et al. (2013). New Phytologist, vol. 197, ss. 323-335 DOI
  • Patterns of nucleotide diversity at photoperiod related genes in the conifer Norway spruce [Picea abies (L.) (Karst)].

    Källman, T., De Mita, S., Larsson, H., Gyllenstrand, N., Heuertz, M. et al. (2014). PLOS ONE, vol. 9, ss. e95306- DOI
  • Sequencing of the needle transcriptome from Norway spruce (Picea abies Karst L.) reveals lower substitution rates, but similar selective constraints in gymnosperms compared to angiosperms.

    Chen, J., Uebbing, S., Gyllenstrand, N., Lagercrantz, U., Lascoux, M. et al. (2012). BMC Genomics, vol. 13, ss. 589- DOI
  • Major difference in short RNA populations among plants - the results of interaction with pathogen?.

    Källman, Thomas; Chen, Jun; Gyllenstrand, Niclas; Lagercrantz, Ulf
  • Disentangling the Roles of History and Local Selection in Shaping Clinal Variation of Allele Frequencies and Gene Expression in Norway Spruce (Picea abies).

    Chen, J., Källman, T., Ma, X., Gyllenstrand, N., Zaina, G. et al. (2012). Genetics, vol. 191, ss. 865-881 DOI
  • A rare major plant QTL determines non-responsiveness to a gall-forming insect in willow.

    Höglund, S., Rönnberg-Wästljung, A., Lagercrantz, U., Larsson, S. (2012). Tree Genetics & Genomes, vol. 8, ss. 1051-1060 DOI
  • Polymorphism and divergence of two willow species, Salix viminalis L. and Salix schwerinii E. Wolf.

    Berlin, S., Fogelqvist, J., Lascoux, M., Lagercrantz, U., Rönnberg-Wästljung, A. (2011). G3, vol. 1, ss. 387-400 DOI
  • Evolution of the PEBP Gene Family in Plants: Functional Diversification in Seed Plant Evolution.

    Karlgren, A., Gyllenstrand, N., Källman, T., Sundström, J., Moore, D. et al. (2011). Plant Physiology, vol. 156, ss. 1967-1977 DOI
  • High-density linkage mapping and evolution of paralogs and orthologs in Salix and Populus.

    Berlin, S., Lagercrantz, U., von Arnold, S., Öst, T., Rönnberg-Wästljung, A. (2010). BMC Genomics, vol. 11, ss. 129- DOI
  • Non-radioactive in situ hybridization protocol applicable for Norway spruce and a range of plant species..

    Karlgren, A., Carlsson, J., Gyllenstrand, N., Lagercrantz, U., Sundström, J. (2009). Journal of Visualized Experiments DOI
  • Does the core circadian clock in the moss Physcomitrella patens (Bryophyta) comprise a single loop?.

    Holm, K., Källman, T., Gyllenstrand, N., Hedman, H., Lagercrantz, U. (2010). BMC Plant Biology, vol. 10, ss. 109- DOI
  • Early evolution of the MFT-like gene family in plants.

    Hedman, H., Källman, T., Lagercrantz, U. (2009). Plant Molecular Biology, vol. 70, ss. 359-369 DOI
  • At the end of the day: a common molecular mechanism for photoperiod responses in plants?.

    Lagercrantz, U. (2009). Journal of Experimental Botany, vol. 60, ss. 2501-2515 DOI
  • Splicing variation at a FLOWERING LOCUS C homeolog is associated with flowering time variation in the tetraploid Capsella bursa-pastoris.

    Slotte, T., Huang, H., Holm, K., Ceplitis, A., Onge, K. et al. (2009). Genetics, vol. 183, ss. 337-345 DOI
  • Polymorphism and divergence at three duplicate genes in Brassica nigra.

    Sjödin, P., Hedman, H., Kruskopf Österberg, M., Gustafsson, S., Lagercrantz, U. et al. (2008). Journal of Molecular Evolution, vol. 66, ss. 581-590 DOI
  • Recent degeneration of an old duplicated flowering time gene in Brassica nigra.

    Sjödin, P., Hedman, H., Shavorskaya, O., Finet, C., Lascoux, M. et al. (2007). Heredity, vol. 98, ss. 375-384 DOI
  • A Norway spruce FLOWERING LOCUS T homolog is implicated in control of growth rhythm in conifers.

    Gyllenstrand, N., Clapham, D., Källman, T., Lagercrantz, U. (2007). Plant Physiology, vol. 144, ss. 248-257 DOI
  • Microarray analysis reveals altered expression of a large number of nuclear genes in developing cytoplasmic male sterile Brassica napus flowers.

    Carlsson, J., Lagercrantz, U., Sundström, J., Teixeira, R., Wellmer, F. et al. (2007). The Plant Journal, vol. 49, ss. 452-462 DOI
  • Differential expression of genes important for adaptation in Capsella bursa-pastoris (Brassicaceae).

    Slotte, T., Holm, K., McIntyre, L., Lagercrantz, U., Lascoux, M. (2007). Plant Physiology, vol. 145, ss. 160-173 DOI
  • Genetic diversity and the relative importance of sexual and asexual reproduction in populations of Melampsora epitea..

    Samils, B., Lagercrantz, U., Lascoux, M., Gullberg, U. (2001). Eur. J. Plant Path, vol. 107, ss. 871-881
  • Genetic mapping of sex-linked markers in Salix viminalis.

    Semerikov, V., Lagercrantz, U., Tsahouras, V., Rönnberg-Wästljung, A., Alström-Rapaport, A. et al. (2003). Heredity, vol. 91, ss. 293-299
  • Mapping of Quantitative Trait Loci (QTL) affecting autumn freezing resistance and related traits in Salix.

    Tsarouhas, V., Gullberg, U., Lagercrantz, U. (2004). Theoretical and Applied Genetics, vol. 198, ss. 1335-1342
  • Expression of Chia4-Pa chitinase genes during somatic and zygotic embryo development in Norway spruce (Picea abies): similarities and differences between gymnosperm and angiosperm class IV chitinases..

    Wiweger, M., Farbos, I., Ingouff, M., Lagercrantz, U., Von Arnold, S. (2003). J Exp Bot, vol. 54, ss. 2691-9
  • Mapping of quantitative trait loci controlling timing of bud flush in Salix..

    Tsarouhas, V., Gullberg, U., Lagercrantz, U. (2003). Hereditas, vol. 138, ss. 172-8
  • An AFLP and RFLP linkage map and quantitative trait locus (QTL) analysis of growth traits in Salix..

    Tsarouhas, Gullberg, Lagercrantz (2002). Theor Appl Genet, vol. 105, ss. 277-288
  • STY1 regulates auxin homeostasis and affects apical-basal patterning of the Arabidopsis gynoecium..

    Sohlberg, J., MyrenÃ¥s, M., Kuusk, S., Lagercrantz, U., Kowalczyk, M. et al. (2006). Plant J, vol. 47, ss. 112-23
  • Sequence divergence at the putative flowering time locus COL1 in Brassicaceae..

    Shavorskaya, O., Lagercrantz, U. (2006). Mol Phylogenet Evol, vol. 39, ss. 846-54
  • Genetic structure of Melampsora epitea populations in Swedish Salix viminalis populations.

    Samils, B., Lagercrantz, U., Lascoux, M., Gullberg, U. (2001). Eur. J. For. Path., vol. 107, ss. 399-404
  • Comparative genome mapping in Brassica.

    Lagercrantz, U., Lydiate, D. (1996). GENETICS, vol. 144, ss. 1903-1910
  • Sequence variation and haplotype structure at the putative flowering-time locus COL1 of Brassica nigra.

    Lagercrantz, U., Österberg, M., Lascoux, M. (2002). Molecular Biology and Evolution, vol. 19, ss. 1474-1482
  • Rapid evolution of the family of CONSTANS LIKE genes in plants..

    Lagercrantz, U., Axelsson, T. (2000). Mol Biol Evol, vol. 17, ss. 1499-507
  • Comparative mapping in Arabidopsis and Brassica, fine scale genome collinearity and congruence of genes controlling flowering time..

    Lagercrantz, U., Putterill, J., Coupland, G., Lydiate, D. (1996). Plant J, vol. 9, ss. 13-20
  • Comparative mapping between Arabidopsis thaliana and Brassica nigra indicates that Brassica genomes have evolved through extensive genome replication accompanied by chromosome fusions and frequent rearrangements..

    Lagercrantz, U. (1998). Genetics, vol. 150, ss. 1217-28
  • Naturally occurring indel variation in the B. nigra COL1 gene is associated with variation in flowering time..

    Kruskopf-Österberg, M., Shavorskaya, O., Lascoux, M., Lagercrantz, U. (2002). Genetics, vol. 161, ss. 299-306
  • PaHB1 is an evolutionary conserved HD-GL2 homeobox gene expressed in the protoderm during Norway spruce embryo development..

    Ingouff, M., Farbos, I., Lagercrantz, U., von Arnold, S. (2001). Genesis, vol. 30, ss. 220-30
  • Amphidiploid Brassica juncea contains conserved progenitor genomes..

    Axelsson, T., Bowman, C., Sharpe, A., Lydiate, D., Lagercrantz, U. (2000). Genome, vol. 43, ss. 679-88
  • Multiple flowering time QTLs within several Brassica species could be the result of duplicated copies of one ancestral gene..

    Axeisson, T., Shavorskaya, O., Lagercrantz, U. (2001). Genome, vol. 44, ss. 856-64
  • Black mustard.

    Das, S., Lagercrantz, U., Lascoux, M. (2006). I Genome mapping and molecular breeding in plants .
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