Publications

Näsvall, Karin

Rates and patterns of genome evolution in Lepidoptera

2023.

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Supplementary Data File 1. Wing polyphenism in a water strider is caused by photoperiod-induced expression of the Fat/Hippo pathway

Gudmunds, Erik; Armisen, David

2023.

Highly differentiated loci resolve phylogenetic relationships in the Bean Goose complex

Ottenburghs, Jente; Honka, Johanna; Heikkinen, Marja E.; Madsen, Jesper et al.

Part of BMC ECOLOGY AND EVOLUTION, 2023.

DOI for Highly differentiated loci resolve phylogenetic relationships in the Bean Goose complex Download full text (pdf) of Highly differentiated loci resolve phylogenetic relationships in the Bean Goose complex

Assortative Mating in an Ecological Context: Effects of Mate Choice Errors and Relative Species Abundance on the Frequency and Asymmetry of Hybridization

Qvarnström, Anna; Veen, Thor; Husby, Arild; Ålund, Murielle et al.

Part of American Naturalist, p. 125-137, 2023.

DOI for Assortative Mating in an Ecological Context: Effects of Mate Choice Errors and Relative Species Abundance on the Frequency and Asymmetry of Hybridization Download full text (pdf) of Assortative Mating in an Ecological Context: Effects of Mate Choice Errors and Relative Species Abundance on the Frequency and Asymmetry of Hybridization

Experimental Life History Evolution Results in Sex-specific Evolution of Gene Expression in Seed Beetles

Immonen, Elina; Sayadi, Ahmed; Stojkovic, Biljana; Savkovic, Uros et al.

Part of Genome Biology and Evolution, 2023.

DOI for Experimental Life History Evolution Results in Sex-specific Evolution of Gene Expression in Seed Beetles Download full text (pdf) of Experimental Life History Evolution Results in Sex-specific Evolution of Gene Expression in Seed Beetles

Gudmunds, Erik

From environmental cue to phenotypic variation – a functional investigation of wing polyphenism in an emerging model species

2023.

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Stochastic nuclear organization and host-dependent allele contribution in Rhizophagus irregularis

van Creij, Jelle; Auxier, Ben; An, Jianyong; Wijfjes, Raul Y. et al.

Part of BMC Genomics, 2023.

DOI for Stochastic nuclear organization and host-dependent allele contribution in Rhizophagus irregularis Download full text (pdf) of Stochastic nuclear organization and host-dependent allele contribution in Rhizophagus irregularis

Chase, Madeline

Speciation genomics in Ficedula flycatchers

2023.

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Larger genomes show improved buffering of adult fitness against environmental stress in seed beetles

Boman, Jesper; Arnqvist, Göran

Part of Biology Letters, 2023.

DOI for Larger genomes show improved buffering of adult fitness against environmental stress in seed beetles Download full text (pdf) of Larger genomes show improved buffering of adult fitness against environmental stress in seed beetles

The swan genome and transcriptome, it is not all black and white

Karawita, Anjana C.; Cheng, Yuanyuan; Chew, Keng Yih; Challagulla, Arjun et al.

Part of Genome Biology, 2023.

DOI for The swan genome and transcriptome, it is not all black and white Download full text (pdf) of The swan genome and transcriptome, it is not all black and white

A Phylogenomic Assessment of Processes Underpinning Convergent Evolution in Open-Habitat Chats

Kakhki, Niloofar Alaei; Schweizer, Manuel; Lutgen, Dave; Bowie, Rauri C. K. et al.

Part of Molecular biology and evolution, 2023.

DOI for A Phylogenomic Assessment of Processes Underpinning Convergent Evolution in Open-Habitat Chats

Tandem Repeat DNA Provides Many Cytological Markers for Hybrid Zone Analysis in Two Subspecies of the Grasshopper Chorthippus parallelus

Navarro-Dominguez, Beatriz; Cabrero, Josefa; Lopez-Leon, Maria Dolores; Ruiz-Ruano, Francisco J. et al.

Part of Genes, 2023.

DOI for Tandem Repeat DNA Provides Many Cytological Markers for Hybrid Zone Analysis in Two Subspecies of the Grasshopper Chorthippus parallelus Download full text (pdf) of Tandem Repeat DNA Provides Many Cytological Markers for Hybrid Zone Analysis in Two Subspecies of the Grasshopper Chorthippus parallelus

Spatial cumulant models enable spatially informed treatment strategies and analysis of local interactions in cancer systems

Hamis, Sara; Somervuo, Panu; Ågren, Arvid; Tadele, Dagim Shiferaw et al.

Part of Journal of Mathematical Biology, 2023.

DOI for Spatial cumulant models enable spatially informed treatment strategies and analysis of local interactions in cancer systems Download full text (pdf) of Spatial cumulant models enable spatially informed treatment strategies and analysis of local interactions in cancer systems

From high masked to high realized genetic load in inbred Scandinavian wolves

Smeds, Linnéa; Ellegren, Hans

Part of Molecular Ecology, p. 1567-1580, 2023.

DOI for From high masked to high realized genetic load in inbred Scandinavian wolves Download full text (pdf) of From high masked to high realized genetic load in inbred Scandinavian wolves

On the origin and structure of haplotype blocks

Shipilina, Daria; Pal, Arka; Stankowski, Sean; Chan, Yingguang Frank et al.

Part of Molecular Ecology, p. 1441-1457, 2023.

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Whole-genome phylogeography of the blue-faced honeyeater (Entomyzon cyanotis) and discovery and characterization of a neo-Z chromosome

Burley, John T.; Orzechowski, Sophia C. M.; Sin, Simon Yung Wa; Edwards, Scott V.

Part of Molecular Ecology, p. 1248-1270, 2023.

DOI for Whole-genome phylogeography of the blue-faced honeyeater (Entomyzon cyanotis) and discovery and characterization of a neo-Z chromosome

Migratory behaviour is positively associated with genetic diversity in butterflies

Garcia-Berro, Aurora; Talla, Venkat; Vila, Roger; Wai, Hong Kar et al.

Part of Molecular Ecology, p. 560-574, 2023.

DOI for Migratory behaviour is positively associated with genetic diversity in butterflies Download full text (pdf) of Migratory behaviour is positively associated with genetic diversity in butterflies

QTL mapping of the narrow-branch "Pendula" phenotype in Norway spruce (Picea abies L. Karst.)

Gil-Munoz, Francisco; Bernhardsson, Carolina; Ranade, Sonali Sachin; Scofield, Douglas et al.

Part of Tree Genetics & Genomes, 2023.

DOI for QTL mapping of the narrow-branch "Pendula" phenotype in Norway spruce (Picea abies L. Karst.) Download full text (pdf) of QTL mapping of the narrow-branch "Pendula" phenotype in Norway spruce (Picea abies L. Karst.)

Imputed genomes and haplotype-based analyses of the Picts of early medieval Scotland reveal fine-scale relatedness between Iron Age, early medieval and the modern people of the UK

Morez, Adeline; Britton, Kate; Noble, Gordon; Günther, Torsten et al.

Part of PLOS Genetics, 2023.

DOI for Imputed genomes and haplotype-based analyses of the Picts of early medieval Scotland reveal fine-scale relatedness between Iron Age, early medieval and the modern people of the UK Download full text (pdf) of Imputed genomes and haplotype-based analyses of the Picts of early medieval Scotland reveal fine-scale relatedness between Iron Age, early medieval and the modern people of the UK

Caecilian Genomes Reveal the Molecular Basis of Adaptation and Convergent Evolution of Limblessness in Snakes and Caecilians

Ovchinnikov, Vladimir; Uliano-Silva, Marcela; Wilkinson, Mark; Wood, Jonathan et al.

Part of Molecular biology and evolution, 2023.

DOI for Caecilian Genomes Reveal the Molecular Basis of Adaptation and Convergent Evolution of Limblessness in Snakes and Caecilians Download full text (pdf) of Caecilian Genomes Reveal the Molecular Basis of Adaptation and Convergent Evolution of Limblessness in Snakes and Caecilians

Maternal transmission gives way to social transmission during gut microbiota assembly in wild mice

Wanelik, Klara M.; Raulo, Aura; Troitsky, Tanya; Husby, Arild et al.

Part of ANIMAL MICROBIOME, 2023.

DOI for Maternal transmission gives way to social transmission during gut microbiota assembly in wild mice Download full text (pdf) of Maternal transmission gives way to social transmission during gut microbiota assembly in wild mice

Interdisciplinary analyses of the remains from three gallery graves at Kinnekulle: tracing Late Neolithic and Early Bronze Age societies in inland Southwestern Sweden

Blank, Malou; Tornberg, Anna; Sjogren, Karl-Goran; Knipper, Corina et al.

Part of Archaeological and Anthropological Sciences, 2023.

DOI for Interdisciplinary analyses of the remains from three gallery graves at Kinnekulle: tracing Late Neolithic and Early Bronze Age societies in inland Southwestern Sweden Download full text (pdf) of Interdisciplinary analyses of the remains from three gallery graves at Kinnekulle: tracing Late Neolithic and Early Bronze Age societies in inland Southwestern Sweden

When and why are mitochondria paternally inherited?

Munasinghe, Manisha; Ågren, Arvid J.

Part of Current Opinion in Genetics and Development, 2023.

DOI for When and why are mitochondria paternally inherited? Download full text (pdf) of When and why are mitochondria paternally inherited?

The fine-scale recombination rate variation and associations with genomic features in a butterfly

Palahi i Torres, Aleix; Höök, Lars; Näsvall, Karin; Shipilina, Daria et al.

Part of Genome Research, p. 810-823, 2023.

DOI for The fine-scale recombination rate variation and associations with genomic features in a butterfly Download full text (pdf) of The fine-scale recombination rate variation and associations with genomic features in a butterfly

Evaluating coevolution in a horizontally transmitted mutualism

Stoy, Kayla S.; Chavez, Joselyne; De Las Casas, Valeria; Talla, Venkat et al.

Part of Evolution, p. 166-185, 2023.

DOI for Evaluating coevolution in a horizontally transmitted mutualism

Differences in mating system and predicted parental conflict affect post-pollination reproductive isolation in a flowering plant

Petren, Hampus; Thosteman, Hanna; Stift, Marc; Toräng, Per et al.

Part of Evolution, p. 1019-1030, 2023.

DOI for Differences in mating system and predicted parental conflict affect post-pollination reproductive isolation in a flowering plant Download full text (pdf) of Differences in mating system and predicted parental conflict affect post-pollination reproductive isolation in a flowering plant

The evolutionary maintenance of ancient recombining sex chromosomes in the ostrich

Yazdi, Homa Papoli; Olito, Colin; Kawakami, Takeshi; Unneberg, Per et al.

Part of PLOS Genetics, 2023.

DOI for The evolutionary maintenance of ancient recombining sex chromosomes in the ostrich Download full text (pdf) of The evolutionary maintenance of ancient recombining sex chromosomes in the ostrich

Larval transcriptomes reflect the evolutionary history of plant-insect associations

Celorio-Mancera, Maria de la Paz; Steward, Rachel A.; Pruisscher, Peter; Smialowska, Agata et al.

Part of Evolution, p. 519-533, 2023.

DOI for Larval transcriptomes reflect the evolutionary history of plant-insect associations Download full text (pdf) of Larval transcriptomes reflect the evolutionary history of plant-insect associations

Sexually antagonistic selection maintains genetic variance when sexual dimorphism evolves

Kaufmann, Philipp; Howie, James M; Immonen, Elina

Part of Proceedings of the Royal Society of London. Biological Sciences, 2023.

DOI for Sexually antagonistic selection maintains genetic variance when sexual dimorphism evolves Download full text (pdf) of Sexually antagonistic selection maintains genetic variance when sexual dimorphism evolves

Contrasting outcomes of genome reduction in mikrocytids and microsporidians

Zarsky, Vojtech; Karnkowska, Anna; Boscaro, Vittorio; Trznadel, Morelia et al.

Part of BMC Biology, 2023.

DOI for Contrasting outcomes of genome reduction in mikrocytids and microsporidians Download full text (pdf) of Contrasting outcomes of genome reduction in mikrocytids and microsporidians

Opposing effects of plant traits on diversification

Anderson, Bruce; Pannell, John; Billiard, Sylvain; Burgarella, Concetta et al.

Part of iScience, 2023.

DOI for Opposing effects of plant traits on diversification Download full text (pdf) of Opposing effects of plant traits on diversification

Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles

Kaufmann, Philipp; Wiberg, R. Axel W.; Papachristos, Konstantinos; Scofield, Douglas et al.

Part of Molecular biology and evolution, 2023.

DOI for Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles Download full text (pdf) of Y-Linked Copy Number Polymorphism of Target of Rapamycin Is Associated with Sexual Size Dimorphism in Seed Beetles

Nascent evolution of recombination rate differences as a consequence of chromosomal rearrangements

Näsvall, Karin; Boman, Jesper; Höök, Lars; Vila, Roger et al.

Part of PLOS Genetics, 2023.

DOI for Nascent evolution of recombination rate differences as a consequence of chromosomal rearrangements Download full text (pdf) of Nascent evolution of recombination rate differences as a consequence of chromosomal rearrangements

Seed predation-induced Allee effects, seed dispersal and masting jointly drive the diversity of seed sources during population expansion

Doublet, Violette; Roques, Lionel; Klein, Etienne K.; Lefevre, Francois et al.

Part of Journal of Mathematical Biology, 2023.

DOI for Seed predation-induced Allee effects, seed dispersal and masting jointly drive the diversity of seed sources during population expansion

Environmental stress during larval development induces DNA methylation shifts in the migratory painted lady butterfly (Vanessa cardui)

Boman, Jesper; Zhu, Yishu; Höök, Lars; Vila, Roger et al.

Part of Molecular Ecology, p. 3513-3523, 2023.

DOI for Environmental stress during larval development induces DNA methylation shifts in the migratory painted lady butterfly (Vanessa cardui) Download full text (pdf) of Environmental stress during larval development induces DNA methylation shifts in the migratory painted lady butterfly (Vanessa cardui)

Forest Fire Influence on Tomicus piniperda-Associated Fungal Communities and Phloem Nutrient Availability of Colonized Pinus sylvestris

Kluting, Kerri; Strid, Ylva; Six, Diana; Rosling, Anna

Part of Microbial Ecology, p. 224-239, 2023.

DOI for Forest Fire Influence on Tomicus piniperda-Associated Fungal Communities and Phloem Nutrient Availability of Colonized Pinus sylvestris Download full text (pdf) of Forest Fire Influence on Tomicus piniperda-Associated Fungal Communities and Phloem Nutrient Availability of Colonized Pinus sylvestris

Developmental bias predicts 60 million years of wing shape evolution

Rohner, Patrick T.; Berger, David

Part of Proceedings of the National Academy of Sciences of the United States of America, 2023.

DOI for Developmental bias predicts 60 million years of wing shape evolution Download full text (pdf) of Developmental bias predicts 60 million years of wing shape evolution

Base composition, codon usage and patterns of gene sequence evolution in butterflies.

Näsvall, Karin; Boman, Jesper; Talla, Venkat; Backström, Niclas

Part of Genome Biology and Evolution, ISSN 1759-6653, EISSN 1759-6653, 2023.

DOI for Base composition, codon usage and patterns of gene sequence evolution in butterflies. Download full text (pdf) of Base composition, codon usage and patterns of gene sequence evolution in butterflies.

High-density linkage maps and chromosome level genome assemblies unveil direction and frequency of extensive structural rearrangements in wood white butterflies (Leptidea spp.)

Höök, Lars; Näsvall, Karin; Vila, R.; Wiklund, C. et al.

Part of Chromosome Research, 2023.

DOI for High-density linkage maps and chromosome level genome assemblies unveil direction and frequency of extensive structural rearrangements in wood white butterflies (Leptidea spp.) Download full text (pdf) of High-density linkage maps and chromosome level genome assemblies unveil direction and frequency of extensive structural rearrangements in wood white butterflies (Leptidea spp.)

Eine Idee mit Biss

Ågren, Arvid

Part of Merkur, p. 75-82, 2022.

Wild epigenetics: insights from epigenetic studies on natural populations

Husby, Arild

Part of Proceedings of the Royal Society of London. Biological Sciences, 2022.

DOI for Wild epigenetics: insights from epigenetic studies on natural populations Download full text (pdf) of Wild epigenetics: insights from epigenetic studies on natural populations

Episodes of Diversification and Isolation in Island Southeast Asian and Near Oceanian Male Lineages

Karmin, Monika; Flores, Rodrigo; Saag, Lauri; Hudjashov, Georgi et al.

Part of Molecular biology and evolution, 2022.

DOI for Episodes of Diversification and Isolation in Island Southeast Asian and Near Oceanian Male Lineages Download full text (pdf) of Episodes of Diversification and Isolation in Island Southeast Asian and Near Oceanian Male Lineages

Paxilloboletus gen. nov., a new lamellate bolete genus from tropical Africa

Badou, Sylvestre A.; Furneaux, Brendan R.; De Kesel, André; Kalsoom, Faheema et al.

Part of Mycological progress, p. 243-256, 2022.

DOI for Paxilloboletus gen. nov., a new lamellate bolete genus from tropical Africa Download full text (pdf) of Paxilloboletus gen. nov., a new lamellate bolete genus from tropical Africa

Global urban environmental change drives adaptation in white clover

Santangelo, James S.; Ness, Rob W.; Cohan, Beata; Fitzpatrick, Connor R. et al.

Part of Science, 2022.

DOI for Global urban environmental change drives adaptation in white clover

Effects of operational taxonomic unit inference methods on soil microeukaryote community analysis using long‐read metabarcoding

Eshghi Sahraei, Shadi; Furneaux, Brendan; Kluting, Kerri; Zakieh, Mustafa et al.

Part of Ecology and Evolution, 2022.

DOI for Effects of operational taxonomic unit inference methods on soil microeukaryote community analysis using long‐read metabarcoding Download full text (pdf) of Effects of operational taxonomic unit inference methods on soil microeukaryote community analysis using long‐read metabarcoding

Whole-genome resequencing of temporally stratified samples reveals substantial loss of haplotype diversity in the highly inbred Scandinavian wolf population

Viluma, Agnese; Flagstad, Oystein; Akesson, Mikael; Wikenros, Camilla et al.

Part of Genome Research, p. 449-458, 2022.

DOI for Whole-genome resequencing of temporally stratified samples reveals substantial loss of haplotype diversity in the highly inbred Scandinavian wolf population Download full text (pdf) of Whole-genome resequencing of temporally stratified samples reveals substantial loss of haplotype diversity in the highly inbred Scandinavian wolf population

A Nearly Neutral Model of Molecular Signatures of Natural Selection after Change in Population Size

Müller, Rebekka; Kaj, Ingemar; Mugal, Carina

Part of Genome Biology and Evolution, 2022.

DOI for A Nearly Neutral Model of Molecular Signatures of Natural Selection after Change in Population Size Download full text (pdf) of A Nearly Neutral Model of Molecular Signatures of Natural Selection after Change in Population Size

Sahraei, Shadi Eshghi

Symbiosis in Arbuscular Mycorrhizal Fungi: Unearthing genomic signatures

2022.

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Effects of environment and genotype on dispersal differ across departure, transfer and settlement in a butterfly metapopulation

DiLeo, Michelle F.; Nonaka, Etsuko; Husby, Arild; Saastamoinen, Marjo

Part of Proceedings of the Royal Society of London. Biological Sciences, 2022.

DOI for Effects of environment and genotype on dispersal differ across departure, transfer and settlement in a butterfly metapopulation Download full text (pdf) of Effects of environment and genotype on dispersal differ across departure, transfer and settlement in a butterfly metapopulation

Trade-Offs Predicted by Metabolic Network Structure Give Rise to Evolutionary Specialization and Phenotypic Diversification

Ekkers, David M.; Tusso Gomez, Sergio; Moreno-Gamez, Stefany; Rillo, Marina C. et al.

Part of Molecular biology and evolution, 2022.

DOI for Trade-Offs Predicted by Metabolic Network Structure Give Rise to Evolutionary Specialization and Phenotypic Diversification Download full text (pdf) of Trade-Offs Predicted by Metabolic Network Structure Give Rise to Evolutionary Specialization and Phenotypic Diversification