Publications from Höglund lab
Publications
Publikationer
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How genomics can help biodiversity conservation
Part of Trends in Genetics, p. 545-559, 2023.
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The era of reference genomes in conservation genomics
Part of Trends in Ecology & Evolution, p. 197-202, 2022.
DOI for The era of reference genomes in conservation genomics Download full text (pdf) of The era of reference genomes in conservation genomics
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Conservation genomics of sibling grouse in boreal forests reveals introgression and adaptive population differentiation in genes controlling epigenetic variation
Part of ZOOLOGICAL RESEARCH, p. 184-187, 2022.
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Low neutral and immunogenetic diversity in northern fringe populations of the green toad Bufotes viridis: implications for conservation
Part of Conservation Genetics, p. 139-149, 2022.
DOI for Low neutral and immunogenetic diversity in northern fringe populations of the green toad Bufotes viridis: implications for conservation Download full text (pdf) of Low neutral and immunogenetic diversity in northern fringe populations of the green toad Bufotes viridis: implications for conservation
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Major Histocompatibility Complex Variation and Haplotype Associated Survival in Response to Experimental Infection of Two Bd-GPL Strains Along a Latitudinal Gradient
Part of Frontiers in Ecology and Evolution, 2022.
DOI for Major Histocompatibility Complex Variation and Haplotype Associated Survival in Response to Experimental Infection of Two Bd-GPL Strains Along a Latitudinal Gradient Download full text (pdf) of Major Histocompatibility Complex Variation and Haplotype Associated Survival in Response to Experimental Infection of Two Bd-GPL Strains Along a Latitudinal Gradient
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The effects of drift and selection on latitudinal genetic variation in Scandinavian common toads (Bufo bufo) following postglacial recolonisation
Part of Heredity, p. 656-667, 2021.
DOI for The effects of drift and selection on latitudinal genetic variation in Scandinavian common toads (Bufo bufo) following postglacial recolonisation Download full text (pdf) of The effects of drift and selection on latitudinal genetic variation in Scandinavian common toads (Bufo bufo) following postglacial recolonisation
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King or royal family?: Testing for species boundaries in the King Cobra, Ophiophagus hannah (Cantor, 1836), using morphology and multilocus DNA analyses
Part of Molecular Phylogenetics and Evolution, 2021.
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Demographic history and divergence of sibling grouse species inferred from whole genome sequencing reveal past effects of climate change
Part of BMC ECOLOGY AND EVOLUTION, 2021.
DOI for Demographic history and divergence of sibling grouse species inferred from whole genome sequencing reveal past effects of climate change Download full text (pdf) of Demographic history and divergence of sibling grouse species inferred from whole genome sequencing reveal past effects of climate change
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Whole genome sequencing reveals high differentiation, low levels of genetic diversity and short runs of homozygosity among Swedish wels catfish
Part of Heredity, p. 79-91, 2021.
DOI for Whole genome sequencing reveals high differentiation, low levels of genetic diversity and short runs of homozygosity among Swedish wels catfish Download full text (pdf) of Whole genome sequencing reveals high differentiation, low levels of genetic diversity and short runs of homozygosity among Swedish wels catfish
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Antimicrobial peptide and sequence variation along a latitudinal gradient in two anurans
Part of BMC Genetics, 2020.
DOI for Antimicrobial peptide and sequence variation along a latitudinal gradient in two anurans Download full text (pdf) of Antimicrobial peptide and sequence variation along a latitudinal gradient in two anurans
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Genomic analysis of demographic history and ecological niche modeling in the endangered Chinese GrouseTetrastes sewerzowi
Part of BMC Genomics, 2020.
DOI for Genomic analysis of demographic history and ecological niche modeling in the endangered Chinese GrouseTetrastes sewerzowi Download full text (pdf) of Genomic analysis of demographic history and ecological niche modeling in the endangered Chinese GrouseTetrastes sewerzowi
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High variation in last male sperm precedence and genital morphology in the emerald damselfly, Lestes sponsa
Part of Biological Journal of the Linnean Society, p. 497-506, 2020.
DOI for High variation in last male sperm precedence and genital morphology in the emerald damselfly, Lestes sponsa Download full text (pdf) of High variation in last male sperm precedence and genital morphology in the emerald damselfly, Lestes sponsa
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Chytrid fungus dynamics and infections associated with movement distances in a red-listed amphibian
Part of Journal of Zoology, p. 164-174, 2020.
DOI for Chytrid fungus dynamics and infections associated with movement distances in a red-listed amphibian Download full text (pdf) of Chytrid fungus dynamics and infections associated with movement distances in a red-listed amphibian
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Genetic differentiation in Sichuan jay (Perisoreus internigrans) and itssibling species Siberian jay (P. infaustus)
Part of Conservation Genetics, p. 319-327, 2020.
DOI for Genetic differentiation in Sichuan jay (Perisoreus internigrans) and itssibling species Siberian jay (P. infaustus) Download full text (pdf) of Genetic differentiation in Sichuan jay (Perisoreus internigrans) and itssibling species Siberian jay (P. infaustus)
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Occurrence of Batrachochytrium dendrobatidis in Sweden: higher infection prevalence in southern species
Part of Diseases of Aquatic Organisms, p. 209-218, 2020.
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Considering landscape connectivity and gene flow in the Anthropocene using complementary landscape genetics and habitat modelling approaches
Part of Landscape Ecology, p. 521-536, 2019.
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Genetic basis of amphibian larval development along a latitudinal gradient: Gene diversity, selection and links with phenotypic variation in transcription factor C/EBP-1
Part of Molecular Ecology, p. 2786-2801, 2019.
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Post-glacial colonization routes coincide with a life-history breakpoint along a latitudinal gradient
Part of Journal of Evolutionary Biology, p. 356-368, 2019.
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Genome Assembly of the Common Pheasant Phasianus colchicus: A Model for Speciation and Ecological Genomics
Part of Genome Biology and Evolution, p. 3326-3331, 2019.
DOI for Genome Assembly of the Common Pheasant Phasianus colchicus: A Model for Speciation and Ecological Genomics Download full text (pdf) of Genome Assembly of the Common Pheasant Phasianus colchicus: A Model for Speciation and Ecological Genomics
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Urban environment and reservoir host species are associated with Batrachochytrium dendrobatidis infection prevalence in the common toad
Part of Diseases of Aquatic Organisms, p. 33-42, 2019.
DOI for Urban environment and reservoir host species are associated with Batrachochytrium dendrobatidis infection prevalence in the common toad Download full text (pdf) of Urban environment and reservoir host species are associated with Batrachochytrium dendrobatidis infection prevalence in the common toad
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Signatures of historical selection on MHC reveal different selection patterns in the moor frog (Rana arvalis)
Part of Immunogenetics, p. 477-484, 2018.
DOI for Signatures of historical selection on MHC reveal different selection patterns in the moor frog (Rana arvalis) Download full text (pdf) of Signatures of historical selection on MHC reveal different selection patterns in the moor frog (Rana arvalis)
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Effects of host species and environmental factors on the prevalence of Batrachochytrium dendrobatidis in northern Europe
Part of PLOS ONE, 2018.
DOI for Effects of host species and environmental factors on the prevalence of Batrachochytrium dendrobatidis in northern Europe Download full text (pdf) of Effects of host species and environmental factors on the prevalence of Batrachochytrium dendrobatidis in northern Europe
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Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi
Part of Scientific Reports, 2018.
DOI for Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi Download full text (pdf) of Development and worldwide use of non-lethal, and minimal population-level impact, protocols for the isolation of amphibian chytrid fungi
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Past and potential future population dynamics of three grouse species using ecological and whole genome coalescent modeling
Part of Ecology and Evolution, p. 6671-6681, 2018.
DOI for Past and potential future population dynamics of three grouse species using ecological and whole genome coalescent modeling Download full text (pdf) of Past and potential future population dynamics of three grouse species using ecological and whole genome coalescent modeling
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Genetic differentiation in the boreal dragonfly Leucorrhinia dubia in the Palearctic region
Part of Biological Journal of the Linnean Society, p. 294-304, 2017.
DOI for Genetic differentiation in the boreal dragonfly Leucorrhinia dubia in the Palearctic region
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Range shifts or extinction?: Ancient DNA and distribution modelling reveal past and future responses to climate warming in cold-adapted birds
Part of Global Change Biology, p. 1425-1435, 2017.
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Drift, selection, or migration?: Processes affecting genetic differentiation and variation along a latitudinal gradient in an amphibian
Part of BMC Evolutionary Biology, 2017.
DOI for Drift, selection, or migration?: Processes affecting genetic differentiation and variation along a latitudinal gradient in an amphibian Download full text (pdf) of Drift, selection, or migration?: Processes affecting genetic differentiation and variation along a latitudinal gradient in an amphibian
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Blood transcriptomes and de novo identification of candidate loci for mating success in lekking great snipe (Gallinago media)
Part of Molecular Ecology, p. 3458-3471, 2017.
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Phylogeography and larval spine length of the dragonfly Leucorhinia dubia in Europe
Part of PLOS ONE, 2017.
DOI for Phylogeography and larval spine length of the dragonfly Leucorhinia dubia in Europe Download full text (pdf) of Phylogeography and larval spine length of the dragonfly Leucorhinia dubia in Europe
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The utility of effective population size in population management 2:estimating demographic history
Part of Conservation Genetics, 2016.
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The utility of effective population size in population management 1:estimating contemporary effective size
Part of Conservation Genetics, 2016.
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Looking into the past: the reaction of three grouse species to climate change over the last million years using whole genome sequences
Part of Molecular Ecology, p. 570-580, 2016.
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Genomics in Conservation: Case Studies and Bridging the Gap between Data and Application Reply
Part of Trends in Ecology & Evolution, p. 83-84, 2016.
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Reply to Garner et al
Part of Trends in Ecology & Evolution, p. 83-84, 2016.
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Effects of a range expansion on adaptive and neutral genetic diversity in dispersal limited Hazel grouse (Bonasa bonasia) in the French Alps
Part of Conservation Genetics, p. 401-412, 2016.
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Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)
Part of Nature Genetics, p. 84-88, 2016.
DOI for Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax) Download full text (pdf) of Structural genomic changes underlie alternative reproductive strategies in the ruff (Philomachus pugnax)
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Ukrainian black grouse Tetrao tetrix: genetic diversity and population structure
Part of Wildlife Biology, p. 283-293, 2015.
DOI for Ukrainian black grouse Tetrao tetrix: genetic diversity and population structure
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Genetic differentiation of western capercaillie in the Carpathian Mountains: the importance of post glacial expansions and habitat connectivity
Part of Biological Journal of the Linnean Society, p. 873-889, 2015.
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A hybrid snipe Gallinago gallinago x G-media found in the wild
Part of Journal of Ornithology = Journal fur Ornithologie, p. 819-827, 2015.
DOI for A hybrid snipe Gallinago gallinago x G-media found in the wild
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Genomics and the challenging translation into conservation practice
Part of Trends in Ecology & Evolution, p. 78-87, 2015.
DOI for Genomics and the challenging translation into conservation practice
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Low MHC variation in isolated island populations of the Natterjack toad (Bufo calamita)
Part of Conservation Genetics, p. 1007-1010, 2015.
DOI for Low MHC variation in isolated island populations of the Natterjack toad (Bufo calamita)
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Gene flow and immigration: genetic diversity and population structure of lions (Panthera leo) in Hwange National Park, Zimbabwe
Part of Conservation Genetics, p. 697-706, 2014.
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Whole genome sequencing of the black grouse (Tetrao tetrix): reference guided assembly suggests faster-Z and MHC evolution
Part of BMC Genomics, p. 1-13, 2014.
DOI for Whole genome sequencing of the black grouse (Tetrao tetrix): reference guided assembly suggests faster-Z and MHC evolution Download full text (pdf) of Whole genome sequencing of the black grouse (Tetrao tetrix): reference guided assembly suggests faster-Z and MHC evolution
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Limited indirect fitness benefits of male group membership in a lekking species
Part of Molecular Ecology, p. 5356-5365, 2014.
DOI for Limited indirect fitness benefits of male group membership in a lekking species
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How and why should we implement genomics into conservation?
Part of Evolutionary Applications, p. 999-1007, 2014.
DOI for How and why should we implement genomics into conservation? Download full text (pdf) of How and why should we implement genomics into conservation?
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Phylogeography and subspecies status of Black Grouse
Part of Journal of Ornithology = Journal fur Ornithologie, p. 13-25, 2014.
DOI for Phylogeography and subspecies status of Black Grouse
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Analyses of historical and current populations of black grouse in Central Europe reveal strong effects of genetic drift and loss of genetic diversity
Part of Conservation Genetics, p. 1183-1195, 2014.
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Phylogeography of willow grouse (Lagopus lagopus) in the Arctic: taxonomic discordance as inferred from molecular data
Part of Biological Journal of the Linnean Society, p. 77-90, 2013.
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Genetic variation and structure in Scandinavian red deer (Cervus elaphus): influence of ancestry, past hunting, and restoration management
Part of Biological Journal of the Linnean Society, p. 43-53, 2013.
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Trends and population dynamics of a Velvet Scoter (Melanitta fusca) population: influence of density dependence and winter climate
Part of Journal of Ornithology = Journal fur Ornithologie, p. 837-847, 2013.
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Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping
Part of BMC Genetics, p. 29-, 2013.
DOI for Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping Download full text (pdf) of Evolutionary history of black grouse major histocompatibility complex class IIB genes revealed through single locus sequence-based genotyping
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Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC
Part of BMC Genomics, p. 553-, 2012.
DOI for Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC Download full text (pdf) of Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC
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Genetic variation among endangered Irish red grouse (Lagopus lagopus hibernicus) populations: implications for conservation and management
Part of Conservation Genetics, p. 639-647, 2012.
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Ecology and mating competition influence sexual dimorphism in Tanganyikan cichlids
Part of Evolutionary Ecology, p. 171-185, 2012.
DOI for Ecology and mating competition influence sexual dimorphism in Tanganyikan cichlids
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Can balancing selection on MHC loci counteract genetic drift in small fragmented populations of black grouse?
Part of Ecology and Evolution, p. 341-353, 2012.
DOI for Can balancing selection on MHC loci counteract genetic drift in small fragmented populations of black grouse? Download full text (pdf) of Can balancing selection on MHC loci counteract genetic drift in small fragmented populations of black grouse?
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Maintenance of gene flow by female-biased dispersal of black grouse, Tetrao tetrix in northern Sweden
Part of Journal of Ornithology = Journal fur Ornithologie, p. 1127-1139, 2012.
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Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC
Part of BMC Genomics, p. 553-, 2012.
DOI for Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC Download full text (pdf) of Sequencing of the core MHC region of black grouse (Tetrao tetrix) and comparative genomics of the galliform MHC
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Transcriptome sequencing of black grouse (Tetrao tetrix) for immune gene discovery and microsatellite development
Part of Open Biology, p. 120054-, 2012.
DOI for Transcriptome sequencing of black grouse (Tetrao tetrix) for immune gene discovery and microsatellite development Download full text (pdf) of Transcriptome sequencing of black grouse (Tetrao tetrix) for immune gene discovery and microsatellite development
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Genetic variation in Black Grouse populations with different lekking systems in the Czech Republic
Part of Journal of Ornithology = Journal fur Ornithologie, p. 37-44, 2011.
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The effects of selection, drift and genetic variation on life-history trait divergence among insular populations of natterjack toad, Bufo calamita
Part of Molecular Ecology, p. 2229-2240, 2010.
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Detecting hybridization between willow grouse (Lagopus lagopus) and rock ptarmigan (L. muta) in Central Sweden through Bayesian admixture analyses and mtDNA screening
Part of Conservation Genetics, p. 557-569, 2010.
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Genetic diversity and differentiation among Lagopus lagopus populations in Scandinavia and Scotland: evolutionary significant units confirmed by SNP markers
Part of Molecular Ecology, p. 2380-2393, 2010.
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Sequence Polymorphism in Candidate Genes for Differences in Winter Plumage between Scottish and Scandinavian Willow Grouse (Lagopus lagopus)
Part of PLoS one, p. e10334-, 2010.
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Genetic studies of black grouse with special reference to conservation biology: a review
Part of Folia zoologica (Brno), p. 135-149, 2009.
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The interaction of multiple environmental stressors affects adaptation to a novel habitat in the natterjack toad Bufo calamita
Part of Journal of Evolutionary Biology, p. 2267-2277, 2009.
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Phylogeography of the Black-tailed Godwit Limosa limosa: substructuring revealed by mtDNA control region sequences
Part of Journal of Ornithology = Journal fur Ornithologie, p. 45-53, 2009.
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A multilocus assay reveals high nucleotide diversity and limited differentiation among Scandinavian willow grouse (Lagopus lagopus)
Part of BMC Genetics, p. 89-, 2008.
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Non-gradual variation in colour morphs of the strawberry poison frog Dendrobates pumilio: genetic and geographical isolation suggest a role for selection in maintaining polymorphism
Part of Molecular Ecology, p. 4284-4294, 2007.
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The MHC class II of the Black grouse (Tetrao tetrix) consists of low numbers of B and Y genes with variable diversity and expression
Part of Immunogenetics, p. 725-734, 2007.
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Population fluctuations and regulation in great snipe: a time-series analysis
Part of Journal of Animal Ecology, p. 740-749, 2007.
DOI for Population fluctuations and regulation in great snipe: a time-series analysis
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Absence of population structure of turbot (Psetta maxima) in the Baltic Sea
Part of Molecular Ecology, p. 115-126, 2007.
DOI for Absence of population structure of turbot (Psetta maxima) in the Baltic Sea
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Kin groups in closely spaced capercaillie leks
Part of Journal of Ornithology = Journal fur Ornithologie, p. 79-84, 2007.
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Genetic variability in European black grouse (Tetrao tetrix)
Part of Conservation Genetics, p. 239-243, 2007.
DOI for Genetic variability in European black grouse (Tetrao tetrix)
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Spatial pattern of MHC class II variation in the great snipe (Gallinago media)
Part of Molecular Ecology, p. 1439-1451, 2007.
DOI for Spatial pattern of MHC class II variation in the great snipe (Gallinago media)
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Inferring local adaptation from QST-FST comparisons: neutral genetic and quantitative trait variation in European populations of great snipe
Part of Journal of Evolutionary Biology, p. 1563-1576, 2007.
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Population differentiation in the redshank (Tringa totanus) as revealed by mitochondrial DNA and amplified fragment length polymorphism.
Part of Conservation Genetics, p. 321-331, 2005.
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Direct and indirect mate choice on leks.
Part of The American Naturalist, p. 145-157, 2005.
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Population differentiation in the redshank (Tringa totanus) as revealed by mitochondrial DNA and amplified fragment length polymorphism markers
Part of Conservation Genetics, p. 321-331, 2005.
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Six polymorphic microsatellite loci in the Natterjack toad, Bufo calamita
Part of Molecular Ecology Notes, p. 639-640, 2005.
DOI for Six polymorphic microsatellite loci in the Natterjack toad, Bufo calamita
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Population fragmentation and genetic variability in European Black Grouse: a progress report
Part of Sylvia: supplement, p. 17-23, 2004.
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Genetic divergence in the superspecies Manacus
Part of Biological Journal of the Linnean Socitey, p. 439-447, 2004.
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Patterns of polymorphism in the MHC class II of a non-passerine bird, the great snipe (Gallinago media)
Part of Immunogenetics, p. 734-741, 2003.
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Part of Avian Science, p. 145–152-, 2002.