Publikationer

Här är en lista på våra publikationer

  • Schweizer, Manuel; Warmuth, Vera; Kakhki, Niloofar Alaei; Aliabadian, Mansour et al.

    Parallel plumage colour evolution and introgressive hybridization in wheatears

    Ingår i Journal of Evolutionary Biology, s. 100-110, 2019.

  • Gunnarsson, Karl; Ekblom, Robert

    Review of the diet specialisation of the Blue-cheeked bee-eater (Merops persicus)

    Ingår i Journal of Ornithology, s. 275-279, 2019.

  • Bayram, Helen L.; Sayadi, Ahmed; Immonen, Elina; Arnqvist, Göran et al.

    Identification of novel ejaculate proteins in a seed beetle and division of labour across male accessory reproductive glands

    Ingår i Insect biochemistry and molecular biology, s. 50 50-57 57, 2019.

  • Ekmansalen, Norbyvägen 14 A, Uppsala 2019-02-25 kl 13:00

    Weissensteiner, Matthias H.

    Evolutionary genomics in Corvids: – From single nucleotides to structural variants

    Open access
  • Wu, Chi-Chih; Klaesson, Axel; Buskas, Julia; Ranefall, Petter et al.

    In situ quantification of individual mRNA transcripts in melanocytes discloses gene regulation of relevance to speciation

    Ingår i Journal of Experimental Biology, 2019.

  • Warmuth, Vera; Ellegren, Hans

    Genotype-free estimation of allele frequencies reduces bias and improves demographic inference from RADSeq data

    Ingår i Molecular Ecology Resources, s. 586-596, 2019.

  • Bolivar, Paulina; Gueguen, Laurent; Duret, Laurent; Ellegren, Hans et al.

    GC-biased gene conversion conceals the prediction of the nearly neutral theory in avian genomes

    Ingår i Genome Biology, 2019.

    Open access
  • Knief, Ulrich; Bossu, Christen M.; Saino, Nicola; Hansson, Bengt et al.

    Epistatic mutations under divergent selection govern phenotypic variation in the crow hybrid zone

    Ingår i Nature Ecology & Evolution, s. 570-576, 2019.

  • Ramnarine, Timothy J. S.; Glaser-Schmitt, Amanda; Catalan, Ana; Parsch, John et al.

    Population Genetic and Functional Analysis of a cis-Regulatory Polymorphism in the Drosophila melanogaster Metallothionein A gene

    Ingår i Genes, 2019.

    Open access
  • Alavioon, Ghazal; Garcia, Andrea Cabrera; LeChatelier, Magali; Maklakov, Alex A. et al.

    Selection for longer lived sperm within ejaculate reduces reproductive ageing in offspring

    Ingår i EVOLUTION LETTERS, s. 198 198-206 206, 2019.

    Open access
  • Richert, Inga; Yager, Patricia L.; Dinasquet, Julie; Logares, Ramiro et al.

    Summer comes to the Southern Ocean: How phytoplankton shape bacterioplankton communities far into the deep dark sea

    Ingår i Ecosphere, 2019.

    Open access
  • Suh, Alexander

    Genome Size Evolution: Small Transposons with Large Consequences

    Ingår i Current Biology, s. R241-R243, 2019.

  • Rettelbach, Agnes; Nater, Alexander; Ellegren, Hans

    How Linked Selection Shapes the Diversity Landscape in Ficedula Flycatchers

    Ingår i Genetics, s. 277-285, 2019.

    Open access
  • Evolutionary Biology Center, Norbyvägen 14, Uppsala 2019-06-11 kl 13:00

    Bolívar, Paulina

    Rates and patterns of molecular evolution in avian genomes

    Open access
  • Boman, Jesper; Frankl-Vilches, Carolina; dos Santos, Michelly da Silva; de Oliveira, Edivaldo H. C. et al.

    The Genome of Blue-Capped Cordon-Bleu Uncovers Hidden Diversity of LTR Retrotransposons in Zebra Finch

    Ingår i Genes, 2019.

    Open access
  • Bernhardsson, Carolina; Vidalis, Amaryllis; Wang, Xi; Scofield, Douglas et al.

    An Ultra-Dense Haploid Genetic Map for Evaluating the Highly Fragmented Genome Assembly of Norway Spruce (Picea abies)

    Ingår i G3, s. 1623-1632, 2019.

  • Xu, Luohao; Auer, Gabriel; Peona, Valentina; Suh, Alexander et al.

    Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds

    Ingår i Nature Ecology & Evolution, s. 834-844, 2019.

  • Ferretti, Ana B. S. M.; Ruiz-Ruano, Francisco J.; Milani, Diogo; Loreto, Vilma et al.

    How dynamic could be the 45S rDNA cistron?: An intriguing variability in a grasshopper species revealed by integration of chromosomal and genomic data

    Ingår i Chromosoma, s. 165-175, 2019.

  • Nadachowska-Brzyska, Krystyna; Burri, Reto; Ellegren, Hans

    Footprints of adaptive evolution revealed by whole Z chromosomes haplotypes in flycatchers

    Ingår i Molecular Ecology, s. 2290-2304, 2019.

    Open access
  • Grosser, Stefanie; Sauer, Jan; Paijmans, Anneke J.; Caspers, Barbara A. et al.

    Fur seal microbiota are shaped by the social and physical environment, show mother-offspring similarities and are associated with host genetic quality

    Ingår i Molecular Ecology, s. 2406-2422, 2019.

  • Smeds, Linnea; Kojola, Ilpo; Ellegren, Hans

    The evolutionary history of grey wolf Y chromosomes

    Ingår i Molecular Ecology, s. 2173-2191, 2019.

    Open access
  • Hooper, Rebecca; Brealey, Jaelle C.; van der Valk, Tom; Alberdi, Antton et al.

    Host-derived population genomics data provides insights into bacterial and diatom composition of the killer whale skin

    Ingår i Molecular Ecology, s. 484-502, 2019.

    Open access
  • Anderson, Jennifer L; Nieuwenhuis, Bart P. S.; Johannesson, Hanna

    Asexual reproduction and growth rate: independent and plastic lifehistory traits in Neurospora crassa

    Ingår i The ISME Journal, s. 780-788, 2019.

    Open access
  • Ottenburghs, Jente

    Multispecies hybridization in birds

    Ingår i Avian Research, 2019.

    Open access
  • Silva, Willian T. A. F.; Sáez-Espinosa, Paula; Torrijo-Boix, Stéphanie; Romero, Alejandro et al.

    The effects of male social environment on sperm phenotype and genome integrity

    Ingår i Journal of Evolutionary Biology, s. 535-544, 2019.

    Open access
  • Prost, Stefan; Armstrong, Ellie E.; Nylander, Johan; Thomas, Gregg W. C. et al.

    Comparative analyses identify genomic features potentially involved in the evolution of birds-of-paradise

    Ingår i GigaScience, 2019.

    Open access
  • Tusso, Sergio; Nieuwenhuis, Bart P. S.; Sedlazeck, Fritz J.; Davey, John W. et al.

    Ancestral admixture is the main determinant of global biodiversity in fission yeast

    Ingår i Molecular Biology and Evolution, 2019.

  • Tao, Yu-Tian; Suo, Fang; Tusso, Sergio; Wang, Yan-Kai et al.

    Intraspecific diversity of fission yeast mitochondrial genomes

    Ingår i Genome Biology and Evolution, 2019.

  • Lindahlsalen, Norbyvägen 14, Uppsala 2019-09-04 kl 13:00

    Wang, Mi

    Gene regulatory evolution in flycatchers: statistical approaches for the analysis of allele-specific expression

    Open access
  • Ellegren, Hans

    Hvad nytt och nyttigt: Tillkomsten av Sveriges första lärda sällskap: Kungl. Vetenskaps-Societeten i Uppsala

    Acta Universitatis Upsaliensis, 2019.

    Open access
  • Hart, Michael W.; Stover, Daryn A.; Guerra, Vanessa; Mozaffari, Sahar V. et al.

    Positive selection on human gamete-recognition genes

    Ingår i PeerJ, 2018.

    Open access
  • Suh, Alexander; Smeds, Linnea; Ellegren, Hans

    Abundant recent activity of retrovirus-like retrotransposons within and among flycatcher species implies a rich source of structural variation in songbird genomes

    Ingår i Molecular Ecology, s. 99-111, 2018.

    Open access
  • Kardos, Marty; Åkesson, Mikael; Fountain, Toby; Flagstad, Oystein et al.

    Genomic consequences of intensive inbreeding in an isolated wolf population

    Ingår i Nature Ecology & Evolution, s. 124-131, 2018.

  • Burdon, Rosalie C. F.; Junker, Robert R.; Scofield, Douglas; Parachnowitsch, Amy L. et al.

    Bacteria colonising Penstemon digitalis show volatile and tissue-specific responses to a natural concentration range of the floral volatile linalool

    Ingår i Chemoecology, s. 11-19, 2018.

    Open access
  • Craig, Rory J.; Suh, Alexander; Wang, Mi; Ellegren, Hans et al.

    Natural selection beyond genes: Identification and analyses of evolutionarily conserved elements in the genome of the collared flycatcher (Ficedula albicollis)

    Ingår i Molecular Ecology, s. 476-492, 2018.

    Open access
  • Valdiosera, Cristina; Günther, Torsten; Carlos Vera-Rodriguez, Juan; Urena, Irene et al.

    Four millennia of Iberian biomolecular prehistory illustrate the impact of prehistoric migrations at the far end of Eurasia

    Ingår i Proceedings of the National Academy of Sciences of the United States of America, s. 3428-3433, 2018.

  • Onuţ-Brännström, Ioana; Benjamin, Mitchell; Scofield, Douglas G.; Starri, Heiðmarsson et al.

    Sharing of photobionts in sympatric populations of Thamnolia and Cetraria lichens: evidence from high-throughput sequencing

    Ingår i Scientific Reports, 2018.

    Open access
  • Urbina, Hector; Breed, Martin F.; Zhao, Weizhou; Gurrala, Kanaka Lakshmi et al.

    Specificity in Arabidopsis thaliana recruitment of root fungal communities from soil and rhizosphere

    Ingår i Fungal Biology, s. 231-240, 2018.

  • Nieuwenhuis, Bart P. S.; Tusso Gomez, Sergio; Bjerling, Pernilla; Stångberg, Josefine et al.

    Repeated evolution of self-compatibility for reproductive assurance

    Ingår i Nature Communications, 2018.

    Open access
  • Fountain, Toby; Husby, Arild; Nonaka, Etsuko; Dileo, Michelle F. et al.

    Inferring dispersal across a fragmented landscape using reconstructed families in the Glanville fritillary butterfly

    Ingår i Evolutionary Applications, s. 287-297, 2018.

    Open access
  • Marsit, Souhir; Dion-Côté, Anne-Marie; Barbash, Daniel A.

    Did Mitochondria Kill the Frog?

    Ingår i Developmental Cell, s. 539-541, 2018.

  • Holt, Carson; Campbell, Michael; Keays, David A.; Edelman, Nathaniel et al.

    Improved Genome Assembly and Annotation for the Rock Pigeon (Columba livia)

    Ingår i G3, s. 1391-1398, 2018.

    Open access
  • Immonen, Elina; Hämäläinen, Anni; Schuett, Wiebke; Tarka, Maja et al.

    Evolution of sex-specific pace-of-life syndromes: genetic architecture and physiological mechanisms

    Ingår i Behavioral Ecology and Sociobiology, 2018.

    Open access
  • Hämäläinen, Anni; Immonen, Elina; Tarka, Maja; Schuett, Wiebke et al.

    Evolution of sex-specific pace-of-life syndromes: causes and consequences

    Ingår i Behavioral Ecology and Sociobiology, 2018.

  • Wang, Jing; Ding, Jihua; Tan, Biyue; Robinson, Kathryn M. et al.

    A major locus controls local adaptation and adaptive life history variation in a perennial plant

    Ingår i Genome Biology, 2018.

    Open access
  • Leal, Luis; Talla, Venkat; Källman, Thomas; Friberg, Magne et al.

    Gene expression profiling across ontogenetic stages in the wood white (Leptidea sinapis) reveals pathways linked to butterfly diapause regulation

    Ingår i Molecular Ecology, s. 935-948, 2018.

  • Dinets, Vladimir; Sokolovskis, Kristaps; Hanley, Daniel; Hauber, Mark E. et al.

    Striking difference in response to expanding brood parasites by birds in western and eastern Beringia

    Ingår i Journal of field ornithology, s. 117-125, 2018.

  • Zamora, Juan Carlos; Svensson, Måns; Kirschner, Roland; Olariaga, Ibai et al.

    Considerations and consequences of allowing DNA sequence data as types of fungal taxa

    Ingår i IMA Fungus, s. 167-185, 2018.

    Open access
  • Dahlö, Martin; Scofield, Douglas; Schaal, Wesley; Spjuth, Ola et al.

    Tracking the NGS revolution: managing life science research on shared high-performance computing clusters

    Ingår i GigaScience, 2018.

    Open access
  • Silva, Willian T. A. F.

    Methylation dynamics during the maternal-to-zygotic genome transition in dioecious species

    Ingår i PLoS ONE, 2018.

    Open access